WormBase Tree Display for Gene: WBGene00011571

WBGene00011571 SMap: S_parent: Sequence: T07C12
  Identity: Version: 2
    Name: CGC_name: ttr-46
      Sequence_name: T07C12.7
      Molecular_name: T07C12.7
        T07C12.7.1
        CE06389
      Other_name: CELE_T07C12.7 Accession_evidence: NDB BX284605
      Public_name: ttr-46
    DB_info: Database: AceView gene 5K431
        WormQTL gene WBGene00011571
        WormFlux gene WBGene00011571
        NDB locus_tag CELE_T07C12.7
        Panther gene CAEEL|WormBase=WBGene00011571|UniProtKB=Q22285
          family PTHR21700
        NCBI gene 179384
        RefSeq protein NM_073160.7
        SwissProt UniProtAcc Q22285
        TREEFAM TREEFAM_ID TF315773
        UniProt_GCRP UniProtAcc Q22285
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 20 Sep 2007 11:48:01 WBPerson2970 Name_change: CGC_name: ttr-46
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ttr
    Allele (32)
    RNASeq_FPKM (74)
    GO_annotation: 00074767
      00074768
      00118806
    Ortholog: WBGene00101314 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00038639 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00062948 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00139545 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00215889 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00223225 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g29 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g6039 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g9541 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g21494 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g21646 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g11842 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g12644 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g8708 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g5116 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g673 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g4036 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00827.g14417 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_V.g20348 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g15777 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00006.g392 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_09584 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_09585 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_016881 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g00337 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g21179 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g21181 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50261500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g15383 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00247411 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00256901 Strongyloides ratti From_analysis: WormBase-Compara
    Paralog (62)
    Structured_description: Automated_description: Predicted to be located in cell surface and extracellular region. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T07C12.7
    Corresponding_transcript: T07C12.7.1
    Other_sequence (95)
    Associated_feature: WBsf647118
      WBsf232310
  Experimental_info: RNAi_result: WBRNAi00103512 Inferred_automatically: RNAi_primary
      WBRNAi00052718 Inferred_automatically: RNAi_primary
      WBRNAi00018341 Inferred_automatically: RNAi_primary
      WBRNAi00035289 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021873
      Expr1035100
      Expr1156328
      Expr2017613
      Expr2035751
    Drives_construct: WBCnstr00030551
    Construct_product: WBCnstr00030551
    Microarray_results (19)
    Expression_cluster (189)
    Interaction (47)
  Map_info: Map: V Position: 2.21811 Error: 0.000529
    Positive: Positive_clone: T07C12 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene