WormBase Tree Display for Gene: WBGene00011561
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WBGene00011561 | SMap | S_parent | Sequence | T07C4 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | ttr-15 | |||||
Sequence_name | T07C4.5 | ||||||
Molecular_name | T07C4.5 | ||||||
T07C4.5.1 | |||||||
CE03639 | |||||||
Other_name | CELE_T07C4.5 | Accession_evidence | NDB | BX284603 | |||
Public_name | ttr-15 | ||||||
DB_info | Database | AceView | gene | 3L429 | |||
WormQTL | gene | WBGene00011561 | |||||
WormFlux | gene | WBGene00011561 | |||||
NDB | locus_tag | CELE_T07C4.5 | |||||
Panther | gene | CAEEL|WormBase=WBGene00011561|UniProtKB=Q22288 | |||||
family | PTHR21700 | ||||||
NCBI | gene | 176448 | |||||
RefSeq | protein | NM_066884.7 | |||||
SwissProt | UniProtAcc | Q22288 | |||||
TREEFAM | TREEFAM_ID | TF315773 | |||||
UniProt_GCRP | UniProtAcc | Q22288 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ttr | ||||||
Allele (16) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00074769 | ||||||
00074770 | |||||||
00118790 | |||||||
Ortholog (30) | |||||||
Paralog (62) | |||||||
Structured_description | Automated_description | Predicted to be located in cell surface and extracellular region. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T07C4.5 | |||||
Corresponding_transcript | T07C4.5.1 | ||||||
Other_sequence | CRC08041_1 | ||||||
CJC00332_1 | |||||||
FD515336.1 | |||||||
Name_isotig02809 | |||||||
GE625140.1 | |||||||
AM743661.1 | |||||||
FD514113.1 | |||||||
PPC10359_1 | |||||||
AE04690 | |||||||
CB043504.1 | |||||||
FD517464.1 | |||||||
CB037403.1 | |||||||
GE626139.1 | |||||||
AYC00326_1 | |||||||
AE00712 | |||||||
FD515826.1 | |||||||
PPC01088_1 | |||||||
CB037007.1 | |||||||
Dviv_isotig35312 | |||||||
AM743423.1 | |||||||
NBC00633_1 | |||||||
TDC00008_6 | |||||||
Tcir_isotig09209 | |||||||
ACC00348_1 | |||||||
NB07287 | |||||||
TDC02977_1 | |||||||
CB043706.1 | |||||||
CBC12750_1 | |||||||
FD514420.1 | |||||||
CR03043 | |||||||
PPC06871_1 | |||||||
CJC08543_1 | |||||||
NB07967 | |||||||
HC05203 | |||||||
CB038674.1 | |||||||
BG734297.1 | |||||||
CJC12129_1 | |||||||
NBC00864_1 | |||||||
CJC02008_3 | |||||||
HCC00829_1 | |||||||
CSC01009_1 | |||||||
CB037439.1 | |||||||
GE626572.1 | |||||||
HC04419 | |||||||
HCC02861_1 | |||||||
CB043784.1 | |||||||
CJC05769_1 | |||||||
CB039165.1 | |||||||
HC03165 | |||||||
NB08336 | |||||||
Oden_isotig18295 | |||||||
HC04926 | |||||||
Tcol_isotig06030 | |||||||
Associated_feature | WBsf645559 | ||||||
WBsf993977 | |||||||
WBsf225711 | |||||||
WBsf225712 | |||||||
Experimental_info | RNAi_result | WBRNAi00006128 | Inferred_automatically | RNAi_primary | |||
WBRNAi00018347 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00035294 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00052727 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1027293 | ||||||
Expr1035096 | |||||||
Expr1156338 | |||||||
Expr2017579 | |||||||
Expr2035719 | |||||||
Drives_construct | WBCnstr00030559 | ||||||
Construct_product | WBCnstr00030559 | ||||||
Microarray_results (19) | |||||||
Expression_cluster (256) | |||||||
Interaction (177) | |||||||
Map_info | Map | III | Position | 2.38152 | Error | 0.009884 | |
Positive | Positive_clone | T07C4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00049828 | ||||||
WBPaper00062002 | |||||||
WBPaper00063976 | |||||||
WBPaper00064789 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |