WormBase Tree Display for Gene: WBGene00011543
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| WBGene00011543 | SMap | S_parent | Sequence | T06E8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | acl-2 | Person_evidence | WBPerson1105 | |||||
| Sequence_name | T06E8.1 | ||||||||
| Molecular_name | T06E8.1a | ||||||||
| T06E8.1a.1 | |||||||||
| CE06378 | |||||||||
| T06E8.1b | |||||||||
| CE47643 | |||||||||
| T06E8.1b.1 | |||||||||
| Other_name | CELE_T06E8.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | acl-2 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 02 Jul 2004 16:55:44 | WBPerson1971 | Name_change | CGC_name | acl-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | acl | ||||||||
| Allele (56) | |||||||||
| Strain | WBStrain00001290 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Ortholog (39) | |||||||||
| Paralog | WBGene00010339 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | T06E8.1 is orthologous to the human gene 1-ACYLGLYCEROL-3-PHOSPHATE O-ACYLTRANSFERASE 2 (LYSOPHOSPHATIDIC ACID ACYLTRANSFERASE, BETA) (AGPAT2; OMIM:603100), which when mutated leads to disease; T06E8.1 protein is predicted to be mitochondrial. | Paper_evidence | WBPaper00004424 | |||||
| Curator_confirmed | WBPerson1823 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable 1-acylglycerol-3-phosphate O-acyltransferase activity. Predicted to be involved in phosphatidic acid biosynthetic process. Predicted to be located in endoplasmic reticulum. Human ortholog(s) of this gene implicated in congenital generalized lipodystrophy type 1. Is an ortholog of human AGPAT1 (1-acylglycerol-3-phosphate O-acyltransferase 1) and AGPAT2 (1-acylglycerol-3-phosphate O-acyltransferase 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:811 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:325) | ||||
| DOID:0111135 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:325) | ||||||
| Molecular_info | Corresponding_CDS | T06E8.1a | |||||||
| T06E8.1b | |||||||||
| Corresponding_transcript | T06E8.1a.1 | ||||||||
| T06E8.1b.1 | |||||||||
| Other_sequence (30) | |||||||||
| Associated_feature | WBsf669283 | ||||||||
| WBsf1001047 | |||||||||
| WBsf1001048 | |||||||||
| WBsf1001049 | |||||||||
| WBsf1001050 | |||||||||
| WBsf1020263 | |||||||||
| WBsf234308 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00076658 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018316 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052675 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr6622 | ||||||||
| Expr1022190 | |||||||||
| Expr1035089 | |||||||||
| Expr1156280 | |||||||||
| Expr2009153 | |||||||||
| Expr2027390 | |||||||||
| Drives_construct | WBCnstr00002183 | ||||||||
| WBCnstr00030573 | |||||||||
| Construct_product | WBCnstr00030573 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (95) | |||||||||
| Interaction (64) | |||||||||
| Map_info | Map | V | Position | 2.23592 | Error | 0.000847 | |||
| Positive | Positive_clone | T06E8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00028527 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042228 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
