WormBase Tree Display for Gene: WBGene00011526
expand all nodes | collapse all nodes | view schema
WBGene00011526 | SMap | S_parent | Sequence | T06D8 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | cox | |||||
Allele (28) | ||||||
Strain | WBStrain00051372 | |||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00074672 | |||||
00074673 | ||||||
00074674 | ||||||
00074675 | ||||||
00074676 | ||||||
00118768 | ||||||
00118769 | ||||||
00118770 | ||||||
Contained_in_operon | CEOP2524 | |||||
Ortholog (38) | ||||||
Structured_description | Automated_description | Predicted to enable oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor. Predicted to be involved in heme A biosynthetic process. Predicted to be located in mitochondrial inner membrane. Human ortholog(s) of this gene implicated in Leigh disease; hypertrophic cardiomyopathy; and mitochondrial complex IV deficiency nuclear type 6. Is an ortholog of human COX15 (cytochrome c oxidase assembly homolog COX15). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Disease_info | Potential_model | DOID:11984 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2263) | |
DOID:3652 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2263) | |||
DOID:0080358 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2263) | |||
Molecular_info | Corresponding_CDS | T06D8.5 | ||||
Corresponding_transcript | T06D8.5.1 | |||||
Other_sequence (63) | ||||||
Associated_feature | WBsf650552 | |||||
WBsf223906 | ||||||
Experimental_info | RNAi_result | WBRNAi00000581 | Inferred_automatically | RNAi_primary | ||
WBRNAi00009129 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00026210 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00061564 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00052646 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00112877 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00112817 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00112937 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00033452 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1016276 | |||||
Expr1035078 | ||||||
Expr1156250 | ||||||
Expr2010472 | ||||||
Expr2028712 | ||||||
Drives_construct | WBCnstr00030587 | |||||
Construct_product | WBCnstr00030587 | |||||
Microarray_results (18) | ||||||
Expression_cluster (98) | ||||||
Interaction (94) | ||||||
Map_info | Map | II | Position | 3.36407 | ||
Positive | Positive_clone | T06D8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Reference | WBPaper00038491 | |||||
WBPaper00055090 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |