WormBase Tree Display for Gene: WBGene00011463

WBGene00011463 SMap: S_parent: Sequence: T05A10
  Identity: Version: 1
    Name: Sequence_name: T05A10.6
      Molecular_name: T05A10.6
        T05A10.6.1
        CE40870
      Other_name: CELE_T05A10.6 Accession_evidence: NDB BX284606
      Public_name: T05A10.6
    DB_info: Database: AceView gene XL412
        WormQTL gene WBGene00011463
        WormFlux gene WBGene00011463
        NDB locus_tag CELE_T05A10.6
        NCBI gene 188097
        RefSeq protein NM_077403.6
        TREEFAM TREEFAM_ID TF319390
        TrEMBL UniProtAcc P90960
        UniProt_GCRP UniProtAcc P90960
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (30)
    RNASeq_FPKM (74)
    Ortholog (19)
    Structured_description: Automated_description: Enriched in g1 and neurons based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including skn-1; daf-12; and eat-2 based on microarray and RNA-seq studies. Is affected by six chemicals including Tunicamycin; D-glucose; and cholesterol based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: CAP superfamily. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T05A10.6
    Corresponding_CDS_history: T05A10.6:wp173
    Corresponding_transcript: T05A10.6.1
    Other_sequence: CJC09338_1
      CBC09756
    Associated_feature: WBsf654362
      WBsf1006823
      WBsf237893
  Experimental_info: RNAi_result: WBRNAi00045987 Inferred_automatically: RNAi_primary
      WBRNAi00035164 Inferred_automatically: RNAi_primary
      WBRNAi00018174 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1013295
      Expr1156056
      Expr2005838
      Expr2024055
    Drives_construct: WBCnstr00030636
    Construct_product: WBCnstr00030636
    Microarray_results (19)
    Expression_cluster: WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00040420:ALM_PLM_enriched
      WBPaper00040420:FLP_enriched
      WBPaper00042194:nhr-114(RNAi)_downregulated
      WBPaper00042215:wdr-23(tm1817)_upregulated
      WBPaper00042561:smg-2(RNAi)_upregulated
      WBPaper00042561:smgl-1(RNAi)_upregulated
      WBPaper00044037:eat-2_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045390:tunicamycin_downregulated
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045774:clk-1_upregulated
      WBPaper00046012:tdp-1(ok803)_upregulated
      WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
      WBPaper00050344:ASER-neuron_enriched
      WBPaper00050370:dpy-21(e428)_L3_upregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_25C
      WBPaper00050801:DAF-12_dauer_regulome
      WBPaper00050990:NMDA-neuron_enriched
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053771:down_by_skn-1(RNAi)_at_dpy-7(e88)
      WBPaper00054758:alg-1(gk204)_downregulated
      WBPaper00055354:eat-2(ad1116)_upregulated
      WBPaper00055386:eat-2(ad465)_upregulated
      WBPaper00055482:pmt-2(RNAi)_upregulated
      WBPaper00055626:pry-1(mu38)_downregulated
      WBPaper00055648:nerve-ring_expressed
      WBPaper00055971:nhl-2(ok818)_25C_upregulated
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00057041:spc-1(cas971)_downregulated
      WBPaper00057041:unc-70(cas983)_downregulated
      WBPaper00059334:sacy-1(depletion)_regulated
      WBPaper00059421:daf-1(m40)_upregulated
      WBPaper00059728:20ug_cholesterol_upregulated
      WBPaper00059839:S.maltophilia_regulated
      WBPaper00059895:wounding_upregulated
      WBPaper00059987:Wounding_upregulated
      WBPaper00060100:SiNP_downregulated_mRNA
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060764:swsn-1(os22ts)_upregulated
      WBPaper00061340:g1A
      WBPaper00061340:g1P
      WBPaper00061527:T16H12.9-kin-9_20752
      WBPaper00062156:jmjd-5(zr1234)_upregulated
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00065841:41_0
      WBPaper00065841:41_1
      WBPaper00065841:41_2
      WBPaper00065841:78_0
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00031003:hlh_1_enriched
      WBPaper00036123:Atrazine_regulated
      WBPaper00036286:Pattern_I
      WBPaper00038172:aak-2overexpression_down_regulated
      WBPaper00038172:tax-6null_up_regulated
      WBPaper00040821:Au-NP_regulated
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_EtBr-exposed_51h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:control_vs_UVC-exposed_48h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00045263:nuo-6(qm200)_upregulated
      WBPaper00045673:colistin_downregulated
      WBPaper00047070:N2_starvation_upregulated
      WBPaper00047070:N2_UV_upregulated
      WBPaper00047070:xpa-1_UV_upregulated
      WBPaper00057098:SiO2-nanoparticles_upregulated
    Interaction (13)
  Map_info (2)
  Method: Gene