WormBase Tree Display for Gene: WBGene00011417
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WBGene00011417 | SMap | S_parent | Sequence | T04A11 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | T04A11.2 | |||||||
Molecular_name | T04A11.2 | ||||||||
T04A11.2.1 | |||||||||
CE13124 | |||||||||
Other_name | CELE_T04A11.2 | Accession_evidence | NDB | BX284604 | |||||
Public_name | T04A11.2 | ||||||||
DB_info | Database | AceView | gene | 4N240 | |||||
WormQTL | gene | WBGene00011417 | |||||||
WormFlux | gene | WBGene00011417 | |||||||
NDB | locus_tag | CELE_T04A11.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00011417|UniProtKB=G5ECB5 | |||||||
family | PTHR13774 | ||||||||
NCBI | gene | 188043 | |||||||
RefSeq | protein | NM_069985.3 | |||||||
TREEFAM | TREEFAM_ID | TF314596 | |||||||
TrEMBL | UniProtAcc | G5ECB5 | |||||||
UniProt_GCRP | UniProtAcc | G5ECB5 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (17) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00011440 | ||||||||
00011441 | |||||||||
00011442 | |||||||||
00118687 | |||||||||
00118688 | |||||||||
Ortholog (34) | |||||||||
Paralog | WBGene00011416 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00011419 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WormBase-Compara | |||||||||
WBGene00011420 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WormBase-Compara | |||||||||
WBGene00235310 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable isomerase activity. Predicted to be involved in biosynthetic process. Predicted to be located in cytoplasm. Is an ortholog of human PBLD (phenazine biosynthesis like protein domain containing). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T04A11.2 | |||||||
Corresponding_transcript | T04A11.2.1 | ||||||||
Other_sequence | Oden_isotig15197 | ||||||||
Oden_isotig15198 | |||||||||
Associated_feature (2) | |||||||||
Experimental_info | RNAi_result | WBRNAi00052318 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00052316 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00018096 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00052317 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00018099 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1022630 | ||||||||
Expr1035025 | |||||||||
Expr1155950 | |||||||||
Drives_construct | WBCnstr00030673 | ||||||||
Construct_product | WBCnstr00030673 | ||||||||
Microarray_results (21) | |||||||||
Expression_cluster (81) | |||||||||
Interaction (43) | |||||||||
Map_info | Positive | Positive_clone | T04A11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | 5.97397 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Method | Gene |