WormBase Tree Display for Gene: WBGene00011394
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| WBGene00011394 | SMap | S_parent | Sequence | T03D8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | sshk-1 | Person_evidence | WBPerson260 | |||||
| WBPerson59688 | |||||||||
| Sequence_name | T03D8.7 | ||||||||
| Molecular_name | T03D8.7 | ||||||||
| T03D8.7.1 | |||||||||
| CE18925 | |||||||||
| Other_name | CELE_T03D8.7 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | sshk-1 | ||||||||
| DB_info | Database | AceView | gene | 5V287 | |||||
| WormQTL | gene | WBGene00011394 | |||||||
| WormFlux | gene | WBGene00011394 | |||||||
| NDB | locus_tag | CELE_T03D8.7 | |||||||
| NCBI | gene | 180363 | |||||||
| RefSeq | protein | NM_075615.4 | |||||||
| TrEMBL | UniProtAcc | Q9XTY0 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XTY0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 26 Jan 2024 23:28:21 | WBPerson51134 | Name_change | CGC_name | sshk-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sshk | ||||||||
| Allele (14) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (12) | |||||||||
| Structured_description | Automated_description | Enriched in neurons based on tiling array; microarray; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; RNA-seq; and tiling array studies. Is affected by thirteen chemicals including hydrogen sulfide; methylmercuric chloride; and rotenone based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T03D8.7 | |||||||
| Corresponding_transcript | T03D8.7.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00035087 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00052268 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (4) | |||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (125) | |||||||||
| Interaction | WBInteraction000136475 | ||||||||
| WBInteraction000144958 | |||||||||
| WBInteraction000168200 | |||||||||
| WBInteraction000171667 | |||||||||
| WBInteraction000174773 | |||||||||
| WBInteraction000196369 | |||||||||
| WBInteraction000196455 | |||||||||
| WBInteraction000196597 | |||||||||
| WBInteraction000256993 | |||||||||
| WBInteraction000264157 | |||||||||
| WBInteraction000265536 | |||||||||
| WBInteraction000269784 | |||||||||
| WBInteraction000280627 | |||||||||
| WBInteraction000283823 | |||||||||
| WBInteraction000292509 | |||||||||
| WBInteraction000293018 | |||||||||
| WBInteraction000308817 | |||||||||
| WBInteraction000319822 | |||||||||
| WBInteraction000321149 | |||||||||
| WBInteraction000321647 | |||||||||
| WBInteraction000332501 | |||||||||
| WBInteraction000343136 | |||||||||
| WBInteraction000352505 | |||||||||
| WBInteraction000356765 | |||||||||
| WBInteraction000387565 | |||||||||
| WBInteraction000391593 | |||||||||
| WBInteraction000401578 | |||||||||
| WBInteraction000438040 | |||||||||
| WBInteraction000443667 | |||||||||
| WBInteraction000444638 | |||||||||
| WBInteraction000458486 | |||||||||
| WBInteraction000461841 | |||||||||
| Map_info | Positive | Positive_clone | T03D8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 25.2712 | |||||||
| Reference | WBPaper00041771 | ||||||||
| WBPaper00064216 | |||||||||
| Method | Gene |
