WormBase Tree Display for Gene: WBGene00011312
expand all nodes | collapse all nodes | view schema
WBGene00011312 | SMap | S_parent | Sequence | T01B7 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | trcs-2 | Person_evidence | WBPerson1816 | |||||
Sequence_name | T01B7.6 | ||||||||
Molecular_name | T01B7.6 | ||||||||
T01B7.6.1 | |||||||||
CE43423 | |||||||||
Other_name | CELE_T01B7.6 | Accession_evidence | NDB | BX284602 | |||||
Public_name | trcs-2 | ||||||||
DB_info | Database | AceView | gene | 2J15 | |||||
WormQTL | gene | WBGene00011312 | |||||||
WormFlux | gene | WBGene00011312 | |||||||
NDB | locus_tag | CELE_T01B7.6 | |||||||
NCBI | gene | 174396 | |||||||
RefSeq | protein | NM_063456.6 | |||||||
TrEMBL | UniProtAcc | Q22047 | |||||||
UniProt_GCRP | UniProtAcc | Q22047 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 05 May 2011 12:15:34 | WBPerson2970 | Name_change | CGC_name | trcs-2 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | trcs | ||||||||
Allele (42) | |||||||||
Strain | WBStrain00051412 | ||||||||
RNASeq_FPKM (74) | |||||||||
Contained_in_operon | CEOP2390 | ||||||||
Ortholog (19) | |||||||||
Structured_description | Automated_description | Enriched in ABaraappaa; germ line; sensory neurons; and somatic gonad precursor based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; dpy-10; and hsf-1 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by eleven chemicals including bisphenol S; Alovudine; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T01B7.6 | |||||||
Corresponding_CDS_history | T01B7.6:wp108 | ||||||||
T01B7.6:wp198 | |||||||||
Corresponding_transcript | T01B7.6.1 | ||||||||
Other_sequence | CBC12565_1 | ||||||||
CR09643 | |||||||||
CRC12529_1 | |||||||||
Associated_feature | WBsf988804 | ||||||||
WBsf1012735 | |||||||||
Experimental_info | RNAi_result | WBRNAi00103496 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00086033 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00008249 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00052084 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00035001 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00085820 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00000984 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00017941 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1016324 | ||||||||
Expr1034974 | |||||||||
Expr1155716 | |||||||||
Expr2017486 | |||||||||
Expr2035625 | |||||||||
Drives_construct | WBCnstr00030752 | ||||||||
Construct_product | WBCnstr00030752 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (125) | |||||||||
Interaction (56) | |||||||||
Map_info | Map | II | Position | 0.866896 | Error | 0.001564 | |||
Positive | Positive_clone | T01B7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |