WormBase Tree Display for Gene: WBGene00011300
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| WBGene00011300 | SMap | S_parent | Sequence | R107 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R107.5 | |||||||
| Molecular_name | R107.5a | ||||||||
| R107.5a.1 | |||||||||
| CE00300 | |||||||||
| R107.5b | |||||||||
| CE23918 | |||||||||
| R107.5b.1 | |||||||||
| Other_name | CELE_R107.5 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | R107.5 | ||||||||
| DB_info | Database | AceView | gene | 3K142 | |||||
| WormQTL | gene | WBGene00011300 | |||||||
| WormFlux | gene | WBGene00011300 | |||||||
| NDB | locus_tag | CELE_R107.5 | |||||||
| NCBI | gene | 176279 | |||||||
| RefSeq | protein | NM_066602.7 | |||||||
| NM_066603.8 | |||||||||
| SwissProt | UniProtAcc | P32743 | |||||||
| TREEFAM | TREEFAM_ID | TF315571 | |||||||
| UniProt_GCRP | UniProtAcc | P32743 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (24) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP3568 | ||||||||
| Ortholog (21) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including germ line; intestine; neurons; rectal epithelial cell; and rectum based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including glp-1; daf-12; and hsf-1 based on microarray; tiling array; and RNA-seq studies. Is affected by thirteen chemicals including rotenone; Zidovudine; and sucrose based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R107.5a | |||||||
| R107.5b | |||||||||
| Corresponding_transcript | R107.5a.1 | ||||||||
| R107.5b.1 | |||||||||
| Other_sequence | CR09036 | ||||||||
| CGC00197_1 | |||||||||
| CGC00790_1 | |||||||||
| CBC00463_1 | |||||||||
| CR09672 | |||||||||
| CJC00119_1 | |||||||||
| CRC04579_1 | |||||||||
| CR02167 | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00034806 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00001646 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005618 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051670 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012954 | ||||||||
| Expr1034967 | |||||||||
| Expr1155344 | |||||||||
| Expr2005539 | |||||||||
| Expr2023758 | |||||||||
| Drives_construct | WBCnstr00030763 | ||||||||
| Construct_product | WBCnstr00030763 | ||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (184) | |||||||||
| Interaction | WBInteraction000032246 | ||||||||
| WBInteraction000263909 | |||||||||
| WBInteraction000332515 | |||||||||
| WBInteraction000403384 | |||||||||
| WBInteraction000413219 | |||||||||
| WBInteraction000512995 | |||||||||
| Map_info | Positive | Positive_clone | R107 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | 0.118589 | |||||||
| Method | Gene |
