WormBase Tree Display for Gene: WBGene00011292
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WBGene00011292 | SMap | S_parent | Sequence | R102 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | allo-1 | |||||||
Sequence_name | R102.5 | ||||||||
Molecular_name | R102.5a | ||||||||
R102.5a.1 | |||||||||
CE35601 | |||||||||
R102.5b | |||||||||
CE35602 | |||||||||
R102.5b.1 | |||||||||
Other_name | CELE_R102.5 | Accession_evidence | NDB | BX284604 | |||||
Public_name | allo-1 | ||||||||
DB_info | Database | AceView | gene | 4L460 | |||||
WormQTL | gene | WBGene00011292 | |||||||
WormFlux | gene | WBGene00011292 | |||||||
NDB | locus_tag | CELE_R102.5 | |||||||
NCBI | gene | 177962 | |||||||
RefSeq | protein | NM_069580.7 | |||||||
NM_069579.6 | |||||||||
SwissProt | UniProtAcc | Q9U389 | |||||||
TREEFAM | TREEFAM_ID | TF321834 | |||||||
UniProt_GCRP | UniProtAcc | Q9U389 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 04 Jan 2018 11:02:49 | WBPerson1983 | Name_change | CGC_name | allo-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | allo | ||||||||
Allele (34) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (13) | |||||||||
Contained_in_operon | CEOP4392 | ||||||||
Ortholog (23) | |||||||||
Structured_description | Automated_description | Enables protein homodimerization activity. Involved in autophagosome assembly and regulation of autophagy. Located in cytoplasm. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | R102.5a | |||||||
R102.5b | |||||||||
Corresponding_CDS_history | R102.5a:wp109 | ||||||||
R102.5b:wp109 | |||||||||
Corresponding_transcript (2) | |||||||||
Other_sequence | CRC07284_1 | ||||||||
CJC06633_1 | |||||||||
CBC00833_1 | |||||||||
CR09968 | |||||||||
CJC03232_1 | |||||||||
CJC01093_1 | |||||||||
Associated_feature | WBsf652151 | ||||||||
WBsf652152 | |||||||||
WBsf981815 | |||||||||
WBsf997677 | |||||||||
WBsf1018127 | |||||||||
WBsf230766 | |||||||||
WBsf230767 | |||||||||
Experimental_info | RNAi_result | WBRNAi00113648 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00051660 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00061639 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00109754 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00109801 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00061865 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00017677 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00109707 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00034800 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00109660 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr9432 | ||||||||
Expr14451 | |||||||||
Expr1028712 | |||||||||
Expr1034964 | |||||||||
Expr1155333 | |||||||||
Expr2005535 | |||||||||
Expr2023754 | |||||||||
Drives_construct (2) | |||||||||
Construct_product | WBCnstr00013997 | ||||||||
WBCnstr00030770 | |||||||||
WBCnstr00039382 | |||||||||
Antibody | WBAntibody00002801 | ||||||||
Microarray_results (27) | |||||||||
Expression_cluster (191) | |||||||||
Interaction (38) | |||||||||
Map_info | Map | IV | Position | 4.66475 | |||||
Positive | Positive_clone | R102 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00030887 | ||||||||
WBPaper00038444 | |||||||||
WBPaper00053507 | |||||||||
WBPaper00064006 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |