WormBase Tree Display for Gene: WBGene00011286
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WBGene00011286 | SMap | S_parent | Sequence | R90 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | ttr-29 | |||||
Sequence_name | R90.4 | ||||||
Molecular_name | R90.4 | ||||||
R90.4.1 | |||||||
CE48192 | |||||||
Other_name | CELE_R90.4 | Accession_evidence | NDB | BX284605 | |||
Public_name | ttr-29 | ||||||
DB_info | Database | AceView | gene | 5N388 | |||
WormQTL | gene | WBGene00011286 | |||||
WormFlux | gene | WBGene00011286 | |||||
NDB | locus_tag | CELE_R90.4 | |||||
Panther | gene | CAEEL|WormBase=WBGene00011286|UniProtKB=Q22034 | |||||
family | PTHR21700 | ||||||
NCBI | gene | 187890 | |||||
RefSeq | protein | NM_073826.7 | |||||
TREEFAM | TREEFAM_ID | TF315773 | |||||
TrEMBL | UniProtAcc | Q22034 | |||||
UniProt_GCRP | UniProtAcc | Q22034 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ttr | ||||||
Allele | WBVar00473810 | ||||||
WBVar01500212 | |||||||
WBVar01500213 | |||||||
WBVar01499299 | |||||||
WBVar01057979 | |||||||
WBVar01057980 | |||||||
WBVar01057981 | |||||||
WBVar01057982 | |||||||
WBVar01499316 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00073837 | ||||||
00118547 | |||||||
Ortholog (16) | |||||||
Paralog (62) | |||||||
Structured_description | Automated_description | Predicted to be located in cell surface and extracellular region. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | R90.4 | |||||
Corresponding_CDS_history | R90.4:wp235 | ||||||
Corresponding_transcript | R90.4.1 | ||||||
Other_sequence (45) | |||||||
Associated_feature | WBsf718435 | ||||||
WBsf234741 | |||||||
Experimental_info | RNAi_result | WBRNAi00052060 | Inferred_automatically | RNAi_primary | |||
WBRNAi00017925 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00034985 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1018865 | ||||||
Expr1155693 | |||||||
Expr2017594 | |||||||
Expr2035733 | |||||||
Drives_construct | WBCnstr00030776 | ||||||
Construct_product | WBCnstr00030776 | ||||||
Microarray_results | SMD_R90.4 | ||||||
190467_at | |||||||
A_12_P118366 | |||||||
Aff_R90.4 | |||||||
GPL13394_WBGene00011286 | |||||||
GPL13914_R90.4 | |||||||
GPL14144_R90.4_2-61_0.884_3_B | |||||||
GPL14144_R90.4_252-311_0.746_7_C | |||||||
GPL14144_R90.4_96-155_0.934_1_A | |||||||
GPL19516_CGZ0032466 | |||||||
GPL21109_R90.4 | |||||||
GPL3518_CE06328 | |||||||
GPL8304_CE_WBGene00011286_A | |||||||
GPL8673_R90_4P00075 | |||||||
GPL8673_R90_4P00087 | |||||||
GPL8673_R90_4P00256 | |||||||
GPL9450_R90.4 | |||||||
cea2.i.43129 | |||||||
Expression_cluster (184) | |||||||
Interaction (43) | |||||||
Map_info | Map | V | Position | 4.72601 | Error | 0.000564 | |
Positive | Positive_clone | R90 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00065331 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |