WormBase Tree Display for Gene: WBGene00011285
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WBGene00011285 | SMap | S_parent | Sequence | R90 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | ttr-28 | |||||
Sequence_name | R90.3 | ||||||
Molecular_name | R90.3 | ||||||
R90.3.1 | |||||||
CE48111 | |||||||
Other_name | CELE_R90.3 | Accession_evidence | NDB | BX284605 | |||
Public_name | ttr-28 | ||||||
DB_info | Database | AceView | gene | 5N386 | |||
WormQTL | gene | WBGene00011285 | |||||
WormFlux | gene | WBGene00011285 | |||||
NDB | locus_tag | CELE_R90.3 | |||||
Panther | gene | CAEEL|WormBase=WBGene00011285|UniProtKB=Q22035 | |||||
family | PTHR21700 | ||||||
NCBI | gene | 187889 | |||||
RefSeq | protein | NM_073825.4 | |||||
TREEFAM | TREEFAM_ID | TF315773 | |||||
TrEMBL | UniProtAcc | Q22035 | |||||
UniProt_GCRP | UniProtAcc | Q22035 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ttr | ||||||
Allele (16) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00073838 | ||||||
00118546 | |||||||
Contained_in_operon | CEOP5501 | ||||||
Ortholog (19) | |||||||
Paralog (62) | |||||||
Structured_description | Automated_description | Predicted to be located in cell surface and extracellular region. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | R90.3 | |||||
Corresponding_CDS_history | R90.3:wp235 | ||||||
Corresponding_transcript | R90.3.1 | ||||||
Other_sequence | Tcir_isotig16547 | ||||||
BXC04349_1 | |||||||
Tcol_isotig01289 | |||||||
MHC08474_1 | |||||||
Oden_isotig24020 | |||||||
MH01349 | |||||||
NB07485 | |||||||
Tcol_isotig10411 | |||||||
Tcol_isotig01288 | |||||||
Associated_feature | WBsf234740 | ||||||
Experimental_info | RNAi_result | WBRNAi00052059 | Inferred_automatically | RNAi_primary | |||
WBRNAi00017924 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00034984 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1017771 | ||||||
Expr1155692 | |||||||
Expr2017593 | |||||||
Expr2035732 | |||||||
Drives_construct | WBCnstr00030777 | ||||||
Construct_product | WBCnstr00030777 | ||||||
Microarray_results (18) | |||||||
Expression_cluster (101) | |||||||
Interaction | WBInteraction000240986 | ||||||
WBInteraction000311198 | |||||||
WBInteraction000353634 | |||||||
WBInteraction000405642 | |||||||
WBInteraction000444283 | |||||||
Map_info | Map | V | Position | 4.72464 | Error | 0.00046 | |
Positive | Positive_clone | R90 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |