WormBase Tree Display for Gene: WBGene00011284
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| WBGene00011284 | SMap | S_parent | Sequence | R90 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ttr-27 | |||||||
| Sequence_name | R90.2 | ||||||||
| Molecular_name | R90.2 | ||||||||
| R90.2.1 | |||||||||
| CE06326 | |||||||||
| Other_name | CELE_R90.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | ttr-27 | ||||||||
| DB_info | Database | AceView | gene | 5N384 | |||||
| WormQTL | gene | WBGene00011284 | |||||||
| WormFlux | gene | WBGene00011284 | |||||||
| NDB | locus_tag | CELE_R90.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011284|UniProtKB=Q22032 | |||||||
| family | PTHR21700 | ||||||||
| NCBI | gene | 179769 | |||||||
| RefSeq | protein | NM_073824.6 | |||||||
| TREEFAM | TREEFAM_ID | TF315773 | |||||||
| TrEMBL | UniProtAcc | Q22032 | |||||||
| UniProt_GCRP | UniProtAcc | Q22032 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 20 Sep 2007 11:48:01 | WBPerson2970 | Name_change | CGC_name | ttr-27 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ttr | ||||||||
| Allele | WBVar00473806 | ||||||||
| WBVar01868616 | |||||||||
| WBVar01500212 | |||||||||
| WBVar01500213 | |||||||||
| WBVar01499299 | |||||||||
| WBVar01499316 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00073827 | ||||||||
| 00118545 | |||||||||
| Contained_in_operon | CEOP5501 | ||||||||
| Ortholog (30) | |||||||||
| Paralog (62) | |||||||||
| Structured_description | Automated_description | Predicted to be located in cell surface and extracellular region. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R90.2 | |||||||
| Corresponding_transcript | R90.2.1 | ||||||||
| Other_sequence | AE01825 | ||||||||
| NB06522 | |||||||||
| Tcol_isotig05938 | |||||||||
| HCC06722_1 | |||||||||
| ACC04033_1 | |||||||||
| Name_isotig04590 | |||||||||
| Tcol_isotig12092 | |||||||||
| JI214169.1 | |||||||||
| FG619745.1 | |||||||||
| Tcir_isotig28640 | |||||||||
| Tcir_isotig25752 | |||||||||
| AE00222 | |||||||||
| FD515389.1 | |||||||||
| Acan_isotig05143 | |||||||||
| Name_isotig00022 | |||||||||
| HC05251 | |||||||||
| Tcol_isotig25313 | |||||||||
| Dviv_isotig06908 | |||||||||
| Acan_isotig05139 | |||||||||
| Tcir_isotig06167 | |||||||||
| JK315746.1 | |||||||||
| Tcir_isotig20315 | |||||||||
| NAC01789_1 | |||||||||
| FC552178.1 | |||||||||
| ES741305.1 | |||||||||
| FD515875.1 | |||||||||
| HC02729 | |||||||||
| Tcir_isotig24173 | |||||||||
| BU087550.1 | |||||||||
| EY462883.1 | |||||||||
| Tcol_isotig05847 | |||||||||
| Tcol_isotig05937 | |||||||||
| CSC00154_1 | |||||||||
| Acan_isotig05138 | |||||||||
| CJC06895_1 | |||||||||
| SS02764 | |||||||||
| Tcir_isotig06250 | |||||||||
| CB043217.1 | |||||||||
| Tcol_isotig18999 | |||||||||
| ACC02033_1 | |||||||||
| NBC02679_1 | |||||||||
| Acan_isotig05142 | |||||||||
| Tcol_isotig23183 | |||||||||
| Acan_isotig19854 | |||||||||
| SSC03850_1 | |||||||||
| Tcir_isotig14468 | |||||||||
| JK316002.1 | |||||||||
| HCC00285_1 | |||||||||
| NB07493 | |||||||||
| PPC10579_1 | |||||||||
| Tcir_isotig16322 | |||||||||
| DAC00892_1 | |||||||||
| HC03211 | |||||||||
| DA00199 | |||||||||
| Tcol_isotig05936 | |||||||||
| Tcol_isotig05845 | |||||||||
| Associated_feature | WBsf1001664 | ||||||||
| WBsf234739 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00034983 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00017923 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052058 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015532 | ||||||||
| Expr1155691 | |||||||||
| Expr2017592 | |||||||||
| Expr2035731 | |||||||||
| Drives_construct | WBCnstr00030778 | ||||||||
| Construct_product | WBCnstr00030778 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (153) | |||||||||
| Interaction (11) | |||||||||
| Map_info | Map | V | Position | 4.72353 | Error | 0.000501 | |||
| Positive | Positive_clone | R90 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00065331 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
