Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00011272

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00011272SMapS_parentSequenceR53
IdentityVersion2
NameCGC_namedtmk-1Paper_evidenceWBPaper00046430
Sequence_nameR53.2
Molecular_nameR53.2
R53.2.1
CE03571
Other_nameCELE_R53.2Accession_evidenceNDBBX284602
Public_namedtmk-1
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:52WBPerson1971EventImportedInitial conversion from CDS class of WS125
227 Feb 2015 10:59:22WBPerson2970Name_changeCGC_namedtmk-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdtmk
Allele (54)
RNASeq_FPKM (74)
GO_annotation (22)
Contained_in_operonCEOP2470
CEOP2746
OrthologWBGene00024303Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00067200Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00130854Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00220276Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g7411Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g14806Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g2126Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g185Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g1119Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g26613Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1106Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g21982Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g12675Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g16409Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g22641Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g2306Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00103.g4399Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-dtmk-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold535.g3258Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00347.g9867Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_04717Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_04718Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_004817Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02208Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g6493Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20172200Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g5634Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00175840Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00247698Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00259735Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00262639Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00288149Trichuris murisFrom_analysisWormBase-Compara
SGD:S000003818Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
FB:FBgn0034299Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-990603-11Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
SonicParanoid
HGNC:3061Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
PhylomeDB
SonicParanoid
MGI:108396Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
PhylomeDB
SonicParanoid
RGD:1309614Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
PhylomeDB
SonicParanoid
Structured_descriptionAutomated_descriptionPredicted to enable nucleoside diphosphate kinase activity and thymidylate kinase activity. Predicted to be involved in dTDP biosynthetic process; dTTP biosynthetic process; and dUDP biosynthetic process. Predicted to be located in mitochondrion and nucleus. Is an ortholog of human DTYMK (deoxythymidylate kinase).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSR53.2
Corresponding_transcriptR53.2.1
Other_sequenceEW742747.1
AE03481
Dviv_isotig22233
Oden_isotig13242
Tcol_isotig14224
ACC17311_1
AYC02663_1
Oden_isotig13241
Oden_isotig13240
Acan_isotig11619
Associated_featureWBsf650469
WBsf665983
WBsf665984
WBsf665985
WBsf665986
WBsf665987
WBsf989190
WBsf223732
Experimental_infoRNAi_resultWBRNAi00072282Inferred_automaticallyRNAi_primary
WBRNAi00074638Inferred_automaticallyRNAi_primary
WBRNAi00072281Inferred_automaticallyRNAi_primary
WBRNAi00074639Inferred_automaticallyRNAi_primary
WBRNAi00074640Inferred_automaticallyRNAi_primary
WBRNAi00052037Inferred_automaticallyRNAi_primary
WBRNAi00034967Inferred_automaticallyRNAi_primary
WBRNAi00074637Inferred_automaticallyRNAi_primary
Expr_patternExpr1014853
Expr1034951
Expr1155672
Expr2011113
Expr2029349
Drives_constructWBCnstr00030789
Construct_productWBCnstr00030789
Microarray_results (17)
Expression_cluster (149)
Interaction (85)
Map_infoPositivePositive_cloneR53Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII1.81574
ReferenceWBPaper00038491
WBPaper00048547
WBPaper00049398
WBPaper00049828
WBPaper00055090
MethodGene