WormBase Tree Display for Gene: WBGene00011248

WBGene00011248 SMap: S_parent: Sequence: R11D1
  Identity: Version: 1
    Name: Sequence_name: R11D1.10
      Molecular_name: R11D1.10a
        R11D1.10a.1
        CE37547
        R11D1.10b
      Other_name: CELE_R11D1.10 Accession_evidence: NDB BX284605
      Public_name: R11D1.10
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (31)
    RNASeq_FPKM (74)
    GO_annotation: 00073409
      00073410
      00073411
      00073412
      00073413
      00073414
      00073415
      00118507
    Contained_in_operon: CEOP5368
    Ortholog: WBGene00030333 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00052609 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00149338 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00191977 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00128794 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00103593 Pristionchus pacificus From_analysis: Inparanoid_8
      CBOVI.g175 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g5645 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g21008 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g4940 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g5248 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g18796 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g1030 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g1443 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g4762 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g15172 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g8527 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g18498 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00093.g4146 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_V.g18771 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_00439.g11385 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_13932 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_018389 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g00141 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_50177900 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g16082 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00211008 Caenorhabditis japonica From_analysis: WormBase-Compara
      nigoni.pc_2016.07.11_090.g29110 Caenorhabditis nigoni From_analysis: WormBase-Compara
      FB:FBgn0030694 Drosophila melanogaster From_analysis: Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
      ZFIN:ZDB-GENE-040718-109 Danio rerio From_analysis: Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      HGNC:20758 Homo sapiens From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            Panther
      MGI:1919258 Mus musculus From_analysis: Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
      RGD:1561576 Rattus norvegicus From_analysis: Hieranoid
            OrthoFinder
            OrthoInspector
            Panther
    Structured_description: Automated_description: Predicted to enable phosphatidylinositol-3-phosphate binding activity. Predicted to be involved in abscission and mitotic cytokinesis checkpoint signaling. Predicted to be located in centrosome; cleavage furrow; and midbody. Human ortholog(s) of this gene implicated in progressive familial intrahepatic cholestasis. Is an ortholog of human ZFYVE19 (zinc finger FYVE-type containing 19). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0070221 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:20758)
  Molecular_info: Corresponding_CDS: R11D1.10a
    Corresponding_CDS_history: R11D1.10:wp61
      R11D1.10:wp132
    Corresponding_transcript: R11D1.10b
      R11D1.10a.1
    Other_sequence: ES744644.1
      FC817285.1
      Dviv_isotig18709
      EY460239.1
      Dviv_isotig18708
      Acan_isotig20020
      HBC00985_1
      SRC01469_1
      ACC03513_2
    Associated_feature: WBsf647398
      WBsf1001636
      WBsf1020609
  Experimental_info: RNAi_result: WBRNAi00098082 Inferred_automatically: RNAi_primary
      WBRNAi00017742 Inferred_automatically: RNAi_primary
      WBRNAi00051773 Inferred_automatically: RNAi_primary
      WBRNAi00034854 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1025943
      Expr1034938
      Expr1155437
      Expr2005579
      Expr2023798
    Drives_construct: WBCnstr00030808
    Construct_product: WBCnstr00030808
    Microarray_results (21)
    Expression_cluster (72)
    Interaction: WBInteraction000278647
      WBInteraction000355827
      WBInteraction000387307
      WBInteraction000583821
      WBInteraction000584097
  Map_info: Positive: Positive_clone: R11D1 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 4.61669
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00064934
  Method: Gene