WormBase Tree Display for Gene: WBGene00011194
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| WBGene00011194 | SMap | S_parent | Sequence | R10D12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R10D12.13 | |||||||
| Molecular_name | R10D12.13a | ||||||||
| R10D12.13a.1 | |||||||||
| CE43925 | |||||||||
| R10D12.13b | |||||||||
| CE43822 | |||||||||
| R10D12.13c | |||||||||
| CE23921 | |||||||||
| R10D12.13b.1 | |||||||||
| R10D12.13c.1 | |||||||||
| Other_name | CELE_R10D12.13 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | R10D12.13 | ||||||||
| DB_info | Database | AceView | gene | 5O443 | |||||
| 5O445 | |||||||||
| WormQTL | gene | WBGene00011194 | |||||||
| WormFlux | gene | WBGene00011194 | |||||||
| NDB | locus_tag | CELE_R10D12.13 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011194|UniProtKB=Q9U385 | |||||||
| family | PTHR31840 | ||||||||
| NCBI | gene | 179891 | |||||||
| RefSeq | protein | NM_074067.5 | |||||||
| NM_074068.7 | |||||||||
| NM_001377609.2 | |||||||||
| TREEFAM | TREEFAM_ID | TF316152 | |||||||
| TrEMBL | UniProtAcc | Q9U385 | |||||||
| Q9XVJ7 | |||||||||
| Q9U386 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9U385 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (30) | |||||||||
| Strain | WBStrain00034963 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP5408 | ||||||||
| Ortholog (28) | |||||||||
| Structured_description | Automated_description | Enriched in MSpaaapa; germ line; and intestine based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and let-60 based on microarray and RNA-seq studies. Is affected by five chemicals including paraquat; Atrazine; and Hydrolyzable Tannins based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Ccdc97-like; CCD97-like, C-terminal; and Coiled-coil domain containing protein 97-like, C-terminal. Is an ortholog of human CCDC97 (coiled-coil domain containing 97). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R10D12.13a | |||||||
| R10D12.13b | |||||||||
| R10D12.13c | |||||||||
| Corresponding_CDS_history | R10D12.13a:wp204 | ||||||||
| R10D12.13b:wp204 | |||||||||
| Corresponding_transcript | R10D12.13a.1 | ||||||||
| R10D12.13b.1 | |||||||||
| R10D12.13c.1 | |||||||||
| Other_sequence (12) | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00083341 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00034811 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062339 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051680 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017690 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027280 | ||||||||
| Expr1034915 | |||||||||
| Expr1155355 | |||||||||
| Expr1200247 | |||||||||
| Expr2005541 | |||||||||
| Expr2023760 | |||||||||
| Drives_construct | WBCnstr00030856 | ||||||||
| Construct_product | WBCnstr00030856 | ||||||||
| Microarray_results (34) | |||||||||
| Expression_cluster (95) | |||||||||
| Interaction | WBInteraction000030313 | ||||||||
| Map_info | Positive | Positive_clone | R10D12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 5.86175 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
