WormBase Tree Display for Gene: WBGene00011156
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WBGene00011156 | SMap | S_parent | Sequence | R09B3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | rbm-3.2 | Person_evidence | WBPerson260 | |||||
Sequence_name | R09B3.3 | ||||||||
Molecular_name (3) | |||||||||
Other_name | CELE_R09B3.3 | Accession_evidence | NDB | BX284601 | |||||
Public_name | rbm-3.2 | ||||||||
DB_info | Database | AceView | gene | 1M502 | |||||
WormQTL | gene | WBGene00011156 | |||||||
WormFlux | gene | WBGene00011156 | |||||||
NDB | locus_tag | CELE_R09B3.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00011156|UniProtKB=O45713 | |||||||
family | PTHR45735 | ||||||||
NCBI | gene | 173071 | |||||||
RefSeq | protein | NM_060622.10 | |||||||
TREEFAM | TREEFAM_ID | TF354331 | |||||||
TrEMBL | UniProtAcc | O45713 | |||||||
UniProt_GCRP | UniProtAcc | O45713 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 07 Dec 2017 13:24:47 | WBPerson1983 | Name_change | CGC_name | rbm-3.2 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | rbm | ||||||||
Allele (20) | |||||||||
Strain | WBStrain00031571 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00035037 | ||||||||
00035038 | |||||||||
00035039 | |||||||||
00035040 | |||||||||
00118439 | |||||||||
00118440 | |||||||||
Ortholog | WBGene00055967 | Caenorhabditis remanei | From_analysis | OMA | |||||
TreeFam | |||||||||
Inparanoid_8 | |||||||||
WBGene00038061 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
OMA | |||||||||
WBGene00038062 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
OMA | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00038069 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
OMA | |||||||||
WBGene00055974 | Caenorhabditis remanei | From_analysis | OMA | ||||||
Inparanoid_8 | |||||||||
WBGene00153860 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
TreeFam | |||||||||
WBGene00162565 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
WBGene00055886 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
CSP39.g25586 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
CSP40.g19050 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
FL83_14921 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
OTIPU.nOt.2.0.1.g13886 | Oscheius tipulae | From_analysis | WormBase-Compara | ||||||
chrI_pilon.g2366 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00284304 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00257371 | Strongyloides ratti | From_analysis | WormBase-Compara | ||||||
Paralog (17) | |||||||||
Structured_description | Automated_description | Predicted to enable RNA binding activity. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | R09B3.3 | |||||||
Corresponding_transcript | R09B3.3.1 | ||||||||
Other_sequence (152) | |||||||||
Associated_feature | WBsf649640 | ||||||||
WBsf665009 | |||||||||
WBsf976580 | |||||||||
WBsf976581 | |||||||||
WBsf976582 | |||||||||
WBsf985413 | |||||||||
WBsf1010806 | |||||||||
WBsf220377 | |||||||||
WBsf220378 | |||||||||
Experimental_info | RNAi_result | WBRNAi00034765 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00062336 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00004067 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00051589 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1025989 | ||||||||
Expr1034909 | |||||||||
Expr1155262 | |||||||||
Expr2005510 | |||||||||
Expr2023729 | |||||||||
Microarray_results (18) | |||||||||
Expression_cluster (204) | |||||||||
Interaction (56) | |||||||||
Map_info | Map | I | Position | 12.9285 | |||||
Positive | Positive_clone | R09B3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
WBPaper00060801 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |