WormBase Tree Display for Gene: WBGene00011129
expand all nodes | collapse all nodes | view schema
| WBGene00011129 | SMap | S_parent | Sequence | R07H5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R07H5.9 | |||||||
| Molecular_name | R07H5.9 | ||||||||
| R07H5.9.1 | |||||||||
| CE52857 | |||||||||
| Other_name | CELE_R07H5.9 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | R07H5.9 | ||||||||
| DB_info | Database | AceView | gene | 4L975 | |||||
| WormQTL | gene | WBGene00011129 | |||||||
| WormFlux | gene | WBGene00011129 | |||||||
| NDB | locus_tag | CELE_R07H5.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011129|UniProtKB=Q93935 | |||||||
| family | PTHR31430 | ||||||||
| NCBI | gene | 187690 | |||||||
| RefSeq | protein | NM_069702.6 | |||||||
| TREEFAM | TREEFAM_ID | TF317842 | |||||||
| TrEMBL | UniProtAcc | Q93935 | |||||||
| UniProt_GCRP | UniProtAcc | Q93935 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (26) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (23) | |||||||||
| Paralog | WBGene00007209 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00009502 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010906 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00011297 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00017833 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00016040 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020400 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00044979 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00012120 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enriched in PLM; germ line; intestine; sensory neurons; and in male based on RNA-seq and microarray studies. Is affected by several genes including daf-2; skn-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by fifteen chemicals including rotenone; mianserin; and Zidovudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R07H5.9 | |||||||
| Corresponding_CDS_history | R07H5.9:wp78 | ||||||||
| R07H5.9:wp155 | |||||||||
| R07H5.9:wp268 | |||||||||
| Corresponding_transcript | R07H5.9.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00034732 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00017575 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051517 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00071672 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00071462 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00071463 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026074 | ||||||||
| Expr1155193 | |||||||||
| Expr2005477 | |||||||||
| Expr2023698 | |||||||||
| Drives_construct | WBCnstr00030908 | ||||||||
| Construct_product | WBCnstr00030908 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (136) | |||||||||
| Interaction | WBInteraction000301725 | ||||||||
| WBInteraction000330232 | |||||||||
| WBInteraction000438623 | |||||||||
| Map_info | Positive | Positive_clone | R07H5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 4.92522 | |||||||
| Method | Gene |
