WormBase Tree Display for Gene: WBGene00011074
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| WBGene00011074 | SMap | S_parent | Sequence | R07A4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R07A4.3 | |||||||
| Molecular_name | R07A4.3 | ||||||||
| R07A4.3.1 | |||||||||
| CE43887 | |||||||||
| R07A4.3.2 | |||||||||
| Other_name | CELE_R07A4.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | R07A4.3 | ||||||||
| DB_info | Database | AceView | gene | XL375 | |||||
| WormQTL | gene | WBGene00011074 | |||||||
| WormFlux | gene | WBGene00011074 | |||||||
| NDB | locus_tag | CELE_R07A4.3 | |||||||
| NCBI | gene | 181270 | |||||||
| RefSeq | protein | NM_077397.5 | |||||||
| TrEMBL | UniProtAcc | Q21781 | |||||||
| UniProt_GCRP | UniProtAcc | Q21781 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (63) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00212891 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | |||||
| WormBase-Compara | |||||||||
| CSP28.g5515 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||||
| CSP29.g15968 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
| CSP32.g2082 | Caenorhabditis sulstoni | From_analysis | WormBase-Compara | ||||||
| CSP39.g8501 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
| Sp34_X0076200 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
| chrX_pilon.g19945 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in PVM; hypodermis; intestine; and seam cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray and RNA-seq studies. Is affected by eight chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R07A4.3 | |||||||
| Corresponding_CDS_history | R07A4.3:wp204 | ||||||||
| Corresponding_transcript (2) | |||||||||
| Associated_feature | WBsf1006810 | ||||||||
| WBsf1006811 | |||||||||
| WBsf236310 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00051407 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00034673 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017498 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051408 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034672 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018869 | ||||||||
| Expr1155094 | |||||||||
| Expr2005436 | |||||||||
| Expr2023657 | |||||||||
| Microarray_results | SMD_R07A4.3 | ||||||||
| SMD_R07A4.4 | |||||||||
| 178781_at | |||||||||
| 178906_at | |||||||||
| A_12_P102749 | |||||||||
| Aff_R07A4.3 | |||||||||
| GPL14144_R07A4.3_615-674_0.945_1_A | |||||||||
| GPL19516_CGZ0031179 | |||||||||
| GPL21109_R07A4.3 | |||||||||
| GPL3518_CE03532 | |||||||||
| GPL8304_CE_WBGene00011074_A | |||||||||
| GPL8673_R07A4_3P00197 | |||||||||
| GPL8673_R07A4_3P00292 | |||||||||
| GPL8673_R07A4_3P00458 | |||||||||
| GPL9450_R07A4.3 | |||||||||
| cea2.p.151410 | |||||||||
| Expression_cluster (104) | |||||||||
| Interaction (33) | |||||||||
| Map_info | Positive | Positive_clone | R07A4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 2.45091 | |||||||
| Method | Gene |
