WormBase Tree Display for Gene: WBGene00011071
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WBGene00011071 | SMap | S_parent | Sequence | R06F6 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | Sequence_name | R06F6.8 | |||||||
Molecular_name | R06F6.8a | ||||||||
R06F6.8a.1 | |||||||||
CE36946 | |||||||||
R06F6.8b | |||||||||
CE36947 | |||||||||
R06F6.8b.1 | |||||||||
Other_name | CELE_R06F6.8 | Accession_evidence | NDB | BX284602 | |||||
Public_name | R06F6.8 | ||||||||
DB_info | Database | AceView | gene | 2L104 | |||||
WormQTL | gene | WBGene00011071 | |||||||
WormFlux | gene | WBGene00011071 | |||||||
NDB | locus_tag | CELE_R06F6.8 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00011071|UniProtKB=Q09417 | |||||||
family | PTHR22746 | ||||||||
NCBI | gene | 174664 | |||||||
RefSeq | protein | NM_001383942.2 | |||||||
NM_063927.7 | |||||||||
SwissProt | UniProtAcc | Q09417 | |||||||
TREEFAM | TREEFAM_ID | TF105927 | |||||||
UniProt_GCRP | UniProtAcc | Q09417 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 05 Jul 2004 11:27:39 | WBPerson1983 | Event | Split_into | WBGene00023418 | ||||
Split_into | WBGene00023418 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (94) | |||||||||
Strain | WBStrain00037781 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (18) | |||||||||
Ortholog (44) | |||||||||
Structured_description | Automated_description | Predicted to enable guanyl-nucleotide exchange factor activity and small GTPase binding activity. Predicted to be involved in intracellular protein transport; negative regulation of protein catabolic process; and retrograde transport, endosome to Golgi. Predicted to be located in Golgi membrane; cytosol; and protein-containing complex. Predicted to be part of Ric1-Rgp1 guanyl-nucleotide exchange factor complex. Is an ortholog of human RIC1 (RIC1 homolog, RAB6A GEF complex partner 1). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | R06F6.8a | |||||||
R06F6.8b | |||||||||
Corresponding_CDS_history | R06F6.8a:wp127 | ||||||||
R06F6.8b:wp127 | |||||||||
Corresponding_transcript | R06F6.8a.1 | ||||||||
R06F6.8b.1 | |||||||||
Other_sequence | MJ03863 | ||||||||
SRC00977_1 | |||||||||
SR01292 | |||||||||
MJC02968_1 | |||||||||
CR07649 | |||||||||
JI470821.1 | |||||||||
CRC04932_1 | |||||||||
JI164457.1 | |||||||||
Associated_feature | WBsf650520 | ||||||||
WBsf223841 | |||||||||
WBsf223842 | |||||||||
Experimental_info | RNAi_result | WBRNAi00034670 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00051400 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00062074 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00051401 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00017494 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00064121 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1014667 | ||||||||
Expr1034864 | |||||||||
Expr1155090 | |||||||||
Expr2005434 | |||||||||
Expr2023655 | |||||||||
Drives_construct | WBCnstr00030954 | ||||||||
Construct_product | WBCnstr00030954 | ||||||||
Microarray_results (25) | |||||||||
Expression_cluster (79) | |||||||||
Interaction (15) | |||||||||
Map_info | Positive | Positive_clone | R06F6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | 3.12761 | |||||||
Reference | WBPaper00005736 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
Method | Gene |