WormBase Tree Display for Gene: WBGene00011070

WBGene00011070 SMap: S_parent: Sequence: R06F6
  Identity: Version: 3
    Name: CGC_name: msrp-7 Person_evidence (3)
      Sequence_name: R06F6.7
      Molecular_name: R06F6.7
        R06F6.7.1
        CE01623
      Other_name: nlp-65
        CELE_R06F6.7 Accession_evidence: NDB BX284602
      Public_name: msrp-7
    DB_info: Database: AceView gene 2L103
        WormQTL gene WBGene00011070
        WormFlux gene WBGene00011070
        NDB locus_tag CELE_R06F6.7
        NCBI gene 187643
        RefSeq protein NM_063926.5
        SwissProt UniProtAcc Q09416
        UniProt_GCRP UniProtAcc Q09416
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 22 Feb 2017 13:00:40 WBPerson2970 Name_change: CGC_name: msrp-7
        3 13 Nov 2017 15:54:28 WBPerson1983 Name_change: Other_name: nlp-65
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: msrp
    Allele (22)
    RNASeq_FPKM (74)
    Ortholog: WBGene00025966 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00053454 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00143458 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      CSP26.g1679 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g1180 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g9149 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP32.g2427 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP39.g27679 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g21378 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-msrp-7 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold618.g6096 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      FL83_17664 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_005464 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_20293100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g5813 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in several structures, including MSaaaaapa; MSaapaapa; MSpapaapa; g1; and sensory neurons based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by eight chemicals including aldicarb; rotenone; and Rifampin based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R06F6.7
    Corresponding_transcript: R06F6.7.1
    Other_sequence: CBC14260_1
    Associated_feature: WBsf989493
      WBsf222064
      WBsf222065
  Experimental_info: RNAi_result: WBRNAi00051399 Inferred_automatically: RNAi_primary
      WBRNAi00034669 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1027588
      Expr1155089
      Expr2013798
      Expr2032038
    Drives_construct: WBCnstr00030955
    Construct_product: WBCnstr00030955
    Microarray_results (19)
    Expression_cluster (161)
    Interaction (43)
  Map_info: Positive: Positive_clone: R06F6 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II 3.12754
  Method: Gene