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WormBase Tree Display for Gene: WBGene00011070

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Name Class

WBGene00011070SMapS_parentSequenceR06F6
IdentityVersion3
NameCGC_namemsrp-7Person_evidenceWBPerson227
WBPerson567
WBPerson26880
Sequence_nameR06F6.7
Molecular_nameR06F6.7
R06F6.7.1
CE01623
Other_namenlp-65
CELE_R06F6.7Accession_evidenceNDBBX284602
Public_namemsrp-7
DB_infoDatabaseAceViewgene2L103
WormQTLgeneWBGene00011070
WormFluxgeneWBGene00011070
NDBlocus_tagCELE_R06F6.7
NCBIgene187643
RefSeqproteinNM_063926.5
SwissProtUniProtAccQ09416
UniProt_GCRPUniProtAccQ09416
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:52WBPerson1971EventImportedInitial conversion from CDS class of WS125
222 Feb 2017 13:00:40WBPerson2970Name_changeCGC_namemsrp-7
313 Nov 2017 15:54:28WBPerson1983Name_changeOther_namenlp-65
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmsrp
Allele (22)
RNASeq_FPKM (74)
Ortholog (15)
Structured_descriptionAutomated_descriptionEnriched in several structures, including MSaaaaapa; MSaapaapa; MSpapaapa; g1; and sensory neurons based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by eight chemicals including aldicarb; rotenone; and Rifampin based on microarray and RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSR06F6.7
Corresponding_transcriptR06F6.7.1
Other_sequenceCBC14260_1
Associated_featureWBsf989493
WBsf222064
WBsf222065
Experimental_infoRNAi_resultWBRNAi00051399Inferred_automaticallyRNAi_primary
WBRNAi00034669Inferred_automaticallyRNAi_primary
Expr_patternExpr1027588
Expr1155089
Expr2013798
Expr2032038
Drives_constructWBCnstr00030955
Construct_productWBCnstr00030955
Microarray_results (19)
Expression_clusterWBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038061:aldicarb_upregulated
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_downregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_downregulated_TilingArray
WBPaper00040420:FLP_enriched
WBPaper00040560:hpl-2_embryo_downregulated
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00042561:smgl-1(RNAi)_upregulated
WBPaper00044037:eat-2_upregulated
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044578:reduced-humidity_downregulated_microarray
WBPaper00044736:oscillating_dev_expression
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045316:prg-1_upregulated_L1
WBPaper00045934:wrn-1(gk99)_upregulated
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00047131:daf-2(e1370)_upregulated_hel-1(gk148684)-background
WBPaper00048988:neuron_enriched
WBPaper00048988:neuron_expressed
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050726:starvation_regulated_LowSalt
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053295:lin-22(ot269)_upregulated
WBPaper00053388:dauer_regulated_Cluster2
WBPaper00053599:female_vs_male_downregulated
WBPaper00053664:ins-11(tm1053)_downregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00055013:hmg-3(bar24)_upregulated
WBPaper00055137:S.maltophilia_downregulated
WBPaper00055354:eat-2(ad1116)_upregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00055648:male-vas-deferens_expressed
WBPaper00055648:nerve-ring_expressed
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
WBPaper00055941:nuo-6(qm200)_upregulated
WBPaper00055971:nhl-2(ok818)_20C_downregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_upregulated_N2
WBPaper00056169:rrf-3(pk1426)_upregulated_L2
WBPaper00056290:hsp-6(mg585)_upregulated
WBPaper00056809:smn-1(ok355)_upregulated
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057006:DietaryRestriction_upregulated
WBPaper00057041:unc-70(cas983)_downregulated
WBPaper00057068:numr-1(RNAi)_downregulated
WBPaper00058725:sftb-1(cer6)_upregulated
WBPaper00058948:npr-8(ok1439)_downregulated_OP50
WBPaper00058948:npr-8(ok1439)_downregulated_PA14
WBPaper00058948:PA14_downregulated
WBPaper00059117:B.subtilis_upregulated
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059334:sacy-1(depletion)_regulated
WBPaper00059739:hira-1(gk835598)_upregulated_L1
WBPaper00060014:set-2(zr2012)_downregulated
WBPaper00060100:SiNP_upregulated_mRNA
WBPaper00060273:isp-1(qm150)_upregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060661:sensory-neuron_enriched
WBPaper00061081:E.faecalis_upregulated_N2
WBPaper00061081:E.faecalis_upregulated_skpo-1(ok1640)
WBPaper00061340:g1A_g1P
WBPaper00061340:g1A_parent
WBPaper00061340:Parent_of_g1P_I3
WBPaper00061341:28C_24h_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061424:Diet_MYb131_upregulated
WBPaper00061439:unc-30(ok613)_upregulated
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061527:M04G7.1-R06F6.7
WBPaper00061651:AVM_enriched
WBPaper00061753:csr-1(tor159)_upregulated_20C
WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
WBPaper00061995:mter-4(syb3662syb3403)_downregulated
WBPaper00062095:unc-4(e120)_upregulated_VA-neuron
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062446:nhr-8(hd117)_upregulated
WBPaper00064005:starvation_upregulated_aptf-1(gk794)_mRNA
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064107:lin-35(n745)_upregulated
WBPaper00064156:lbp-3(overexpress)_upregulated
WBPaper00064156:lipl-4(overexpress)_upregulated
WBPaper00064539:nhr-114(gk849)_upregulated
WBPaper00064661:lpd-3(ok2138)_upregulated
WBPaper00064721:fasn-1(g14)_downregulated_starved
WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
WBPaper00065096:25C_vs_20C_upregulated
WBPaper00065096:npr-8(ok1439)_upregulated_Day1_20C
WBPaper00065149:lin-52(n771)_downregulated
WBPaper00065581:hpk-1(pk1393)_upregulated
WBPaper00065623:142
WBPaper00065749:Heat-Shock_downregulated_N2
WBPaper00065841:20_1
WBPaper00065841:41_0
WBPaper00065841:41_1
WBPaper00065841:41_2
WBPaper00065841:51_0
WBPaper00065841:51_1
WBPaper00065926:pgph-2(overepxreesion)_upregulated
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065984:pals-17(syb3980)_upregulated
WBPaper00065993:glp-1(e2141)_upregulated
cgc4489_group_18
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00031662:spaceflight_upregulated
WBPaper00031832:slr-2_regulated
WBPaper00032165:differentially_expressed_with_age_medoid_2
WBPaper00032948:StarveUp3
WBPaper00035227:heat_shock_regulated
WBPaper00036286:Pattern_D
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
WBPaper00041002:HF_11d_0.2mM_Up
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00045263:isp-1(qm150)_upregulated
WBPaper00045437:Toxic-Se_upregulated
WBPaper00047070:N2_starvation_upregulated
WBPaper00047070:N2_UV_upregulated
WBPaper00047070:xpa-1_UV_upregulated
WBPaper00048989:eat-2(ad465)_upregulated_in-DMSO
[cgc5767]:expression_class_M
[cgc5767]:expression_class_SM
Interaction (43)
Map_infoPositivePositive_cloneR06F6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII3.12754
MethodGene