WormBase Tree Display for Gene: WBGene00011069
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WBGene00011069 | SMap | S_parent | Sequence | R06F6 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||
Name | CGC_name | ceh-62 | Person_evidence | WBPerson83 | |||
Sequence_name | R06F6.6 | ||||||
Molecular_name | R06F6.6 | ||||||
R06F6.6.1 | |||||||
CE51240 | |||||||
Other_name | CELE_R06F6.6 | Accession_evidence | NDB | BX284602 | |||
Public_name | ceh-62 | ||||||
DB_info | Database | AceView | gene | 2L101 | |||
WormQTL | gene | WBGene00011069 | |||||
WormFlux | gene | WBGene00011069 | |||||
NDB | locus_tag | CELE_R06F6.6 | |||||
Panther | gene | CAEEL|WormBase=WBGene00011069|UniProtKB=Q09602 | |||||
family | PTHR24333 | ||||||
NCBI | gene | 187642 | |||||
RefSeq | protein | NM_063925.6 | |||||
SwissProt | UniProtAcc | Q09602 | |||||
TREEFAM | TREEFAM_ID | TF351530 | |||||
UniProt_GCRP | UniProtAcc | Q09602 | |||||
Species | Caenorhabditis elegans | ||||||
History (2) | |||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ceh | ||||||
Allele (43) | |||||||
Strain | WBStrain00003388 | ||||||
WBStrain00037742 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00055042 | ||||||
00055043 | |||||||
00055044 | |||||||
00055045 | |||||||
00055046 | |||||||
00118363 | |||||||
Ortholog (31) | |||||||
Paralog (15) | |||||||
Structured_description | Automated_description | Predicted to enable DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Expressed in dorsal nerve cord; neurons; tail neurons; and ventral nerve cord. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | R06F6.6 | |||||
Corresponding_CDS_history | R06F6.6:wp252 | ||||||
Corresponding_transcript | R06F6.6.1 | ||||||
Other_sequence | Oden_isotig20727 | ||||||
Dviv_isotig30065 | |||||||
ACC18728_1 | |||||||
Acan_isotig11853 | |||||||
FG353713.1 | |||||||
EX537241.1 | |||||||
Associated_feature | WBsf978294 | ||||||
WBsf989489 | |||||||
WBsf989490 | |||||||
WBsf989491 | |||||||
WBsf989492 | |||||||
WBsf1013098 | |||||||
WBsf1013099 | |||||||
WBsf1013100 | |||||||
WBsf222063 | |||||||
Gene_product_binds (35) | |||||||
Transcription_factor | WBTranscriptionFactor000456 | ||||||
Experimental_info | RNAi_result | WBRNAi00051398 | Inferred_automatically | RNAi_primary | |||
WBRNAi00017493 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr2092 | ||||||
Expr6471 | |||||||
Expr7631 | |||||||
Expr15601 | |||||||
Expr1015092 | |||||||
Expr1034863 | |||||||
Expr1155088 | |||||||
Expr2009898 | |||||||
Expr2028138 | |||||||
Drives_construct | WBCnstr00003857 | ||||||
WBCnstr00012776 | |||||||
WBCnstr00030956 | |||||||
Construct_product | WBCnstr00016806 | ||||||
WBCnstr00030956 | |||||||
Microarray_results | SMD_R06F6.6 | ||||||
189665_at | |||||||
Aff_R06F6.6 | |||||||
GPL14144_R06F6.6_341-400_0.859_42_B | |||||||
GPL14144_R06F6.6_464-523_0.907_12_A | |||||||
GPL14144_R06F6.6_809-868_0.926_3_C | |||||||
GPL8673_R06F6_6P00177 | |||||||
GPL8673_R06F6_6P00571 | |||||||
Expression_cluster (150) | |||||||
Interaction (65) | |||||||
Map_info | Map | II | Position | 3.12748 | Error | 7.7e-05 | |
Positive | Positive_clone | R06F6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00027309 | ||||||
WBPaper00055090 | |||||||
WBPaper00060123 | |||||||
WBPaper00064212 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |