WormBase Tree Display for Gene: WBGene00011067
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| WBGene00011067 | SMap | S_parent | Sequence | R06F6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | vps-11 | Paper_evidence | WBPaper00031805 | |||||
| Sequence_name | R06F6.2 | ||||||||
| Molecular_name | R06F6.2 | ||||||||
| R06F6.2.1 | |||||||||
| CE43323 | |||||||||
| Other_name | CELE_R06F6.2 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | vps-11 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 29 Apr 2008 17:17:15 | WBPerson2970 | Name_change | CGC_name | vps-11 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | vps | ||||||||
| Allele (83) | |||||||||
| Strain | WBStrain00032155 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (19) | |||||||||
| Contained_in_operon | CEOP2504 | ||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00021058 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable protein-macromolecule adaptor activity. Predicted to be involved in organelle organization and vesicle docking involved in exocytosis. Predicted to be located in endosome. Predicted to be part of HOPS complex. Expressed in gonad. Human ortholog(s) of this gene implicated in dystonia and hypomyelinating leukodystrophy 12. Is an ortholog of human VPS11 (VPS11 core subunit of CORVET and HOPS complexes). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0060796 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:14583) | ||||
| DOID:543 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:14583) | ||||||
| Molecular_info | Corresponding_CDS | R06F6.2 | |||||||
| Corresponding_CDS_history | R06F6.2:wp197 | ||||||||
| Corresponding_transcript | R06F6.2.1 | ||||||||
| Other_sequence (20) | |||||||||
| Associated_feature | WBsf666063 | ||||||||
| WBsf989485 | |||||||||
| WBsf223834 | |||||||||
| WBsf223835 | |||||||||
| WBsf223836 | |||||||||
| WBsf223837 | |||||||||
| Experimental_info | RNAi_result (32) | ||||||||
| Expr_pattern | Expr4024 | ||||||||
| Expr1027953 | |||||||||
| Expr1034861 | |||||||||
| Expr1155085 | |||||||||
| Expr2018009 | |||||||||
| Expr2036146 | |||||||||
| Drives_construct | WBCnstr00030958 | ||||||||
| Construct_product | WBCnstr00030958 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (95) | |||||||||
| Interaction (41) | |||||||||
| Map_info | Map | II | Position | 3.12698 | Error | 5.7e-05 | |||
| Positive | Positive_clone | R06F6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027315 | ||||||||
| WBPaper00031805 | |||||||||
| WBPaper00032272 | |||||||||
| WBPaper00034662 | |||||||||
| WBPaper00035228 | |||||||||
| WBPaper00036342 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
