WormBase Tree Display for Gene: WBGene00011063

WBGene00011063 SMap: S_parent: Sequence: R06C7
  Identity: Version: 2
    Name: CGC_name: cpg-3
      Sequence_name: R06C7.4
      Molecular_name: R06C7.4
        R06C7.4.1
        CE06247
        R06C7.4.2
      Other_name: CELE_R06C7.4 Accession_evidence: NDB BX284601
      Public_name: cpg-3
    DB_info: Database: AceView gene 1H821
        WormQTL gene WBGene00011063
        WormFlux gene WBGene00011063
        NDB locus_tag CELE_R06C7.4
        Panther gene CAEEL|WormBase=WBGene00011063|UniProtKB=Q21771
          family PTHR37973
        NCBI gene 172465
        RefSeq protein NM_059646.8
        SwissProt UniProtAcc Q21771
        TREEFAM TREEFAM_ID TF317375
        UniProt_GCRP UniProtAcc Q21771
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 16 Jun 2006 15:10:10 WBPerson2970 Name_change: CGC_name: cpg-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cpg
    Allele (19)
    Strain: WBStrain00033051
    RNASeq_FPKM (74)
    Ortholog (30)
    Paralog: WBGene00018694 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00077443 Caenorhabditis elegans From_analysis: modENCODE_Pseudogenes
      WBGene00021898 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Concise_description: cgp-3 encodes a putatively secreted protein with an N-terminallow-complexity domain containing 15 potential chondroitin attachmentsites, and a C-terminal EGF-like region; cpg-3 mRNA is enriched inoogenesis, but CPG-3 has no obvious function in mass RNAi assays. Paper_evidence: WBPaper00006390
            WBPaper00027679
          Curator_confirmed: WBPerson567
          Date_last_updated: 02 May 2007 00:00:00
      Automated_description: Expressed in germ line. Is predicted to encode a protein with the following domain: Chondroitin proteoglycan 3. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R06C7.4
    Corresponding_transcript: R06C7.4.1
      R06C7.4.2
    Other_sequence (11)
    Associated_feature: WBsf643438
      WBsf656501
      WBsf217979
  Experimental_info: RNAi_result: WBRNAi00051386 Inferred_automatically: RNAi_primary
      WBRNAi00116975 Inferred_automatically: RNAi_primary
      WBRNAi00034661 Inferred_automatically: RNAi_primary
      WBRNAi00004063 Inferred_automatically: RNAi_primary
      WBRNAi00004062 Inferred_automatically: RNAi_primary
      WBRNAi00008098 Inferred_automatically: RNAi_primary
      WBRNAi00022613 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr4120
      Expr1017799
      Expr1034858
      Expr1155076
      Expr2010484
      Expr2028724
    Drives_construct: WBCnstr00030962
    Construct_product: WBCnstr00030962
    Microarray_results (21)
    Expression_cluster (229)
    Interaction (294)
  Map_info: Map: I Position: 1.85593 Error: 0.001129
    Positive: Positive_clone: R06C7 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027679
    WBPaper00028788
    WBPaper00032249
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene