WormBase Tree Display for Gene: WBGene00011053
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| WBGene00011053 | SMap | S_parent | Sequence | R06B9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | arrd-12 | Person_evidence | WBPerson261 | |||||
| WBPerson522 | |||||||||
| Sequence_name | R06B9.2 | ||||||||
| Molecular_name | R06B9.2a | ||||||||
| R06B9.2a.1 | |||||||||
| CE51535 | |||||||||
| R06B9.2b | |||||||||
| CE51316 | |||||||||
| R06B9.2b.1 | |||||||||
| Other_name | CELE_R06B9.2 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | arrd-12 | ||||||||
| DB_info | Database | AceView | gene | 2O57 | |||||
| WormQTL | gene | WBGene00011053 | |||||||
| WormFlux | gene | WBGene00011053 | |||||||
| NDB | locus_tag | CELE_R06B9.2 | |||||||
| NCBI | gene | 187636 | |||||||
| RefSeq | protein | NM_001322759.1 | |||||||
| NM_001322758.2 | |||||||||
| TrEMBL | UniProtAcc | A0A131MBN2 | |||||||
| A0A131MCQ1 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A131MCQ1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 19 Jul 2010 16:45:41 | WBPerson2970 | Name_change | CGC_name | arrd-12 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | arrd | ||||||||
| Allele (84) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (12) | |||||||||
| Paralog (26) | |||||||||
| Structured_description | Automated_description | Enriched in amphid sheath cell; body wall muscle cell; intestine; and in male based on tiling array and RNA-seq studies. Is affected by several genes including daf-2; clk-1; and hsp-6 based on microarray; tiling array; and RNA-seq studies. Is affected by multi-walled carbon nanotube; Doxycycline; and paraquat based on RNA-seq studies. Is predicted to encode a protein with the following domains: Arrestin (or S-antigen), N-terminal domain; Immunoglobulin E-set; Arrestin-like, N-terminal; and Arrestin-like, C-terminal. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R06B9.2a | |||||||
| R06B9.2b | |||||||||
| Corresponding_CDS_history | R06B9.2:wp252 | ||||||||
| Corresponding_transcript | R06B9.2a.1 | ||||||||
| R06B9.2b.1 | |||||||||
| Other_sequence | FC812525.1 | ||||||||
| Associated_feature | WBsf1013696 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00051373 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1014532 | ||||||||
| Expr1155062 | |||||||||
| Expr2009411 | |||||||||
| Expr2027647 | |||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (69) | |||||||||
| SAGE_tag | SAGE:ttccgtacttcccccga | Strand | Sense | ||||||
| Unambiguously_mapped | |||||||||
| SAGE:tgctcaaaaa | Strand | Antisense | |||||||
| Interaction | WBInteraction000141253 | ||||||||
| WBInteraction000210050 | |||||||||
| WBInteraction000428953 | |||||||||
| WBInteraction000458721 | |||||||||
| Map_info | Map | II | Position | 20.2903 | Error | 0.003989 | |||
| Positive | Positive_clone | R06B9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
