WormBase Tree Display for Gene: WBGene00010954
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| WBGene00010954 | SMap | S_parent | Sequence | M199 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-189 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | M199.6 | ||||||||
| Molecular_name | M199.6 | ||||||||
| M199.6.1 | |||||||||
| CE52395 | |||||||||
| Other_name | CELE_M199.6 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | clec-189 | ||||||||
| DB_info | Database | AceView | gene | 4P887 | |||||
| WormQTL | gene | WBGene00010954 | |||||||
| WormFlux | gene | WBGene00010954 | |||||||
| NDB | locus_tag | CELE_M199.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010954|UniProtKB=Q7YTL4 | |||||||
| family | PTHR47629 | ||||||||
| NCBI | gene | 3565781 | |||||||
| RefSeq | protein | NM_001028152.2 | |||||||
| TREEFAM | TREEFAM_ID | TF316738 | |||||||
| TrEMBL | UniProtAcc | Q7YTL4 | |||||||
| UniProt_GCRP | UniProtAcc | Q7YTL4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-189 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (49) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (16) | |||||||||
| Paralog (115) | |||||||||
| Structured_description | Automated_description | Is affected by rsr-2; met-2; and spr-5 based on tiling array and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | M199.6 | |||||||
| Corresponding_CDS_history | M199.6:wp261 | ||||||||
| Corresponding_transcript | M199.6.1 | ||||||||
| Experimental_info | Expr_pattern | Expr1013103 | |||||||
| Expr1154728 | |||||||||
| Expr2010106 | |||||||||
| Expr2028348 | |||||||||
| Microarray_results | A_12_P118117 | ||||||||
| GPL13394_WBGene00010954 | |||||||||
| GPL13914_M199.6 | |||||||||
| GPL14144_M199.6_709-768_0.942_2_A | |||||||||
| GPL19516_CGZ0030331 | |||||||||
| GPL21109_M199.6 | |||||||||
| GPL8304_CE_WBGene00010954_A | |||||||||
| GPL8673_M199_6P00252 | |||||||||
| GPL8673_M199_6P00471 | |||||||||
| GPL8673_M199_6P00809 | |||||||||
| Expression_cluster (16) | |||||||||
| SAGE_tag | SAGE:caattttctg | Strand | Antisense | ||||||
| SAGE:agaattgatg | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:caatttattg | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:gaaacattgt | Strand | Antisense | |||||||
| Map_info | Map | IV | Position | 12.8379 | |||||
| Positive | Positive_clone | M199 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
