WormBase Tree Display for Gene: WBGene00010953
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| WBGene00010953 | SMap | S_parent | Sequence | M199 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-190 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | M199.4 | ||||||||
| Molecular_name | M199.4 | ||||||||
| M199.4.1 | |||||||||
| CE20021 | |||||||||
| Other_name | CELE_M199.4 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | clec-190 | ||||||||
| DB_info | Database | AceView | gene | 4P890 | |||||
| WormQTL | gene | WBGene00010953 | |||||||
| WormFlux | gene | WBGene00010953 | |||||||
| NDB | locus_tag | CELE_M199.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010953|UniProtKB=Q9NAP0 | |||||||
| family | PTHR23124 | ||||||||
| NCBI | gene | 178423 | |||||||
| RefSeq | protein | NM_070425.6 | |||||||
| TREEFAM | TREEFAM_ID | TF315870 | |||||||
| TrEMBL | UniProtAcc | Q9NAP0 | |||||||
| UniProt_GCRP | UniProtAcc | Q9NAP0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-190 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (37) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (18) | |||||||||
| Paralog (70) | |||||||||
| Structured_description | Automated_description | Enriched in cephalic sheath cell and dopaminergic neurons based on tiling array studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; tiling array; and proteomic studies. Is affected by twenty-three chemicals including 1-methylnicotinamide; rotenone; and D-glucose based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | M199.4 | |||||||
| Corresponding_transcript | M199.4.1 | ||||||||
| Associated_feature | WBsf998687 | ||||||||
| WBsf998688 | |||||||||
| WBsf1018731 | |||||||||
| WBsf1018732 | |||||||||
| WBsf231239 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00017247 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00051018 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034476 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017760 | ||||||||
| Expr1154726 | |||||||||
| Expr2028349 | |||||||||
| Drives_construct | WBCnstr00031031 | ||||||||
| Construct_product | WBCnstr00031031 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (246) | |||||||||
| Interaction (50) | |||||||||
| Map_info | Map | IV | Position | 12.8384 | |||||
| Positive | Positive_clone | M199 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031002 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
