WormBase Tree Display for Gene: WBGene00010901
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WBGene00010901 | SMap | S_parent | Sequence | M28 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | M28.10 | |||||||
Molecular_name | M28.10 | ||||||||
M28.10.1 | |||||||||
CE32913 | |||||||||
Other_name | CELE_M28.10 | Accession_evidence | NDB | BX284602 | |||||
Public_name | M28.10 | ||||||||
DB_info | Database | AceView | gene | 2K939 | |||||
WormQTL | gene | WBGene00010901 | |||||||
WormFlux | gene | WBGene00010901 | |||||||
NDB | locus_tag | CELE_M28.10 | |||||||
NCBI | gene | 187463 | |||||||
RefSeq | protein | NM_063896.8 | |||||||
TREEFAM | TREEFAM_ID | TF343815 | |||||||
TrEMBL | UniProtAcc | Q8I116 | |||||||
UniProt_GCRP | UniProtAcc | Q8I116 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (42) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (18) | |||||||||
Structured_description | Automated_description | Enriched in head mesodermal cell and intestine based on tiling array and RNA-seq studies. Is affected by several genes including daf-2; skn-1; and dpy-10 based on microarray and RNA-seq studies. Is affected by nineteen chemicals including manganese chloride; nicotine; and stavudine based on RNA-seq; proteomic; and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | M28.10 | |||||||
Corresponding_transcript | M28.10.1 | ||||||||
Other_sequence | CRC07861_1 | ||||||||
CBC01385_1 | |||||||||
Associated_feature | WBsf644624 | ||||||||
WBsf222046 | |||||||||
Experimental_info | Expr_pattern | Expr1028484 | |||||||
Expr1034783 | |||||||||
Expr1154733 | |||||||||
Expr2005271 | |||||||||
Expr2023491 | |||||||||
Drives_construct | WBCnstr00031067 | ||||||||
Construct_product | WBCnstr00031067 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (196) | |||||||||
SAGE_tag | SAGE:tgccttcaca | Strand | Sense | ||||||
Unambiguously_mapped | |||||||||
SAGE:acgtcattgg | Strand | Antisense | |||||||
SAGE:aaattctgcg | Strand | Antisense | |||||||
SAGE:cttctcacctccaagca | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:tgtagctgga | Strand | Antisense | |||||||
SAGE:cttctcacct | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:atgtaataaa | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:tgccttcacaaaaggtt | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:atgtaataaaacccctt | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
Interaction | WBInteraction000554165 | ||||||||
WBInteraction000570647 | |||||||||
Map_info | Positive | Positive_clone | M28 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | 3.1224 | |||||||
Method | Gene |