WormBase Tree Display for Gene: WBGene00010858
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| WBGene00010858 | SMap | S_parent | Sequence | M04C9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | M04C9.3 | |||||||
| Molecular_name | M04C9.3a | ||||||||
| M04C9.3a.1 | |||||||||
| CE54261 | |||||||||
| M04C9.3b | |||||||||
| CE42727 | |||||||||
| M04C9.3b.1 | |||||||||
| Other_name | CELE_M04C9.3 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | M04C9.3 | ||||||||
| DB_info | Database | AceView | gene | 1J930 | |||||
| WormQTL | gene | WBGene00010858 | |||||||
| WormFlux | gene | WBGene00010858 | |||||||
| NDB | locus_tag | CELE_M04C9.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010858|UniProtKB=P90933 | |||||||
| family | PTHR23402 | ||||||||
| NCBI | gene | 187440 | |||||||
| RefSeq | protein | NM_060090.7 | |||||||
| NM_001136313.4 | |||||||||
| TREEFAM | TREEFAM_ID | TF313278 | |||||||
| TrEMBL | UniProtAcc | P90933 | |||||||
| B3WFY7 | |||||||||
| UniProt_GCRP | UniProtAcc | P90933 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (16) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00006090 | ||||||||
| 00006091 | |||||||||
| 00006092 | |||||||||
| 00006093 | |||||||||
| 00006094 | |||||||||
| Ortholog (40) | |||||||||
| Paralog | WBGene00008894 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00008897 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010856 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010857 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015436 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00018057 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00012252 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00018056 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable cysteine-type peptidase activity. Predicted to be involved in proteolysis. Predicted to be located in cytoplasm. Is an ortholog of human PGPEP1L (pyroglutamyl-peptidase I like). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | M04C9.3a | |||||||
| M04C9.3b | |||||||||
| Corresponding_CDS_history | M04C9.3:wp129 | ||||||||
| M04C9.3a:wp279 | |||||||||
| Corresponding_transcript | M04C9.3a.1 | ||||||||
| M04C9.3b.1 | |||||||||
| Other_sequence | CBC16617_1 | ||||||||
| Associated_feature | WBsf220077 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00050900 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00004029 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00089123 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025024 | ||||||||
| Expr1154596 | |||||||||
| Expr2005198 | |||||||||
| Expr2023416 | |||||||||
| Drives_construct | WBCnstr00031105 | ||||||||
| Construct_product | WBCnstr00031105 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (134) | |||||||||
| Interaction (20) | |||||||||
| Map_info | Positive | Positive_clone | M04C9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 3.75374 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
