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WormBase Tree Display for Gene: WBGene00010831

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Name Class

WBGene00010831SMapS_parentSequenceM02G9
IdentityVersion2
NameCGC_nameidpp-4Person_evidenceWBPerson1820
Sequence_nameM02G9.2
Molecular_nameM02G9.2
M02G9.2.1
CE41147
Other_nameCELE_M02G9.2Accession_evidenceNDBBX284602
Public_nameidpp-4
DB_infoDatabaseAceViewgene2K611
WormQTLgeneWBGene00010831
WormFluxgeneWBGene00010831
NDBlocus_tagCELE_M02G9.2
PanthergeneCAEEL|WormBase=WBGene00010831|UniProtKB=O17969
familyPTHR31895
NCBIgene187405
RefSeqproteinNM_063821.6
TREEFAMTREEFAM_IDTF318568
TrEMBLUniProtAccO17969
UniProt_GCRPUniProtAccO17969
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:51WBPerson1971EventImportedInitial conversion from CDS class of WS125
204 Jan 2022 10:41:14WBPerson1983Name_changeCGC_nameidpp-4
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classidpp
Allele (60)
RNASeq_FPKM (74)
Ortholog (22)
Paralog (26)
Structured_descriptionAutomated_descriptionEnriched in anterior arcade cell and intestine based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on tiling array; microarray; and RNA-seq studies. Is affected by nineteen chemicals including methylmercury hydroxide; methylmercuric chloride; and sodium arsenite based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function (DUF1096) and Protein of unknown function DUF1096.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSM02G9.2
Corresponding_CDS_historyM02G9.2:wp137
M02G9.2:wp176
Corresponding_transcriptM02G9.2.1
Associated_featureWBsf644602
WBsf989308
WBsf989309
WBsf989310
WBsf989311
WBsf989312
Experimental_infoRNAi_resultWBRNAi00017137Inferred_automaticallyRNAi_primary
WBRNAi00050829Inferred_automaticallyRNAi_primary
Expr_patternExpr1010605
Expr1034746
Expr1154522
Expr2005159
Expr2023379
Drives_constructWBCnstr00031123
Construct_productWBCnstr00031123
Microarray_results (21)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00037950:intestine_embryo_enriched
WBPaper00037950:intestine_embryo_SelectivelyEnriched
WBPaper00038438:D.coniospora_12hr_upregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00038438:S.marcescens_24hr_downregulated_RNAseq
WBPaper00040560:hpl-2_L3_downregulated
WBPaper00042561:smg-2(RNAi)_downregulated
WBPaper00042561:smgl-1(RNAi)_upregulated
WBPaper00043945:MeHg_downregulated
WBPaper00044316:CH3HgCl_7.5uM_downregulated
WBPaper00044736:oscillating_dev_expression
WBPaper00044760:somatic_specific
WBPaper00044786:emr-1(gk119)_upregulated
WBPaper00045017:blmp-1(tm548)_downregulated
WBPaper00045417:128Q-huntingtin_downreglated
WBPaper00046805:csr-1(RNAi)_downregulated_Set1
WBPaper00048988:neuron_expressed
WBPaper00049266:trx-1(ok1449)_regulated_oxidative-stressed
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00050370:dpy-21(e428)_L3_downregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00050990:body-muscle_enriched
WBPaper00050990:body-muscle_expressed
WBPaper00053295:lin-22(ot269)_downregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053368:F.oxysporum_regulated
WBPaper00053402:cco-1(RNAi)_downregulated
WBPaper00053771:down_by_skn-1(RNAi)_at_dpy-7(e88)
WBPaper00053771:up_at_dpy-7(e88)
WBPaper00053810:isp-1(qm150)_downregulated
WBPaper00053810:nuo-6(qm200)_downregulated
WBPaper00054493:hpl-2(tm1489)_upregulated
WBPaper00055013:hmg-3(bar24)_downregulated
WBPaper00055013:hmg-4(RNAi)_downregulated
WBPaper00055354:Allantoin_upregulated
WBPaper00055354:eat-2(ad1116)_upregulated
WBPaper00055354:Metformin_upregulated
WBPaper00055354:Psora-Allantoin_upregulated
WBPaper00055354:Psora_upregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00055386:daf-2(e1370)_upregulated
WBPaper00055941:nuo-6(qm200)_downregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_upregulated_N2
WBPaper00056169:rrf-3(pk1426)_downregulated_adult
WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
WBPaper00056330:glycine_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00057041:unc-70(cas983)_upregulated
WBPaper00057068:ints-4(RNAi)_downregulated
WBPaper00057068:ints-4(RNAi)_downregulated_Cadmium
WBPaper00057154:HeatShock_downregulated_miRNA-target
WBPaper00057154:HeatShock_upregulated_mRNA
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058948:PA14_downregulated
WBPaper00059117:B.subtilis_upregulated
WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
WBPaper00059421:daf-1(m40);daf-3(mgDf90)_downregulated
WBPaper00059421:daf-3(mgDf90)_downregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059728:5ug_cholesterol_upregulated
WBPaper00059728:20ug_cholesterol_upregulated
WBPaper00059739:hira-1(gk835598)_downregulated_L4
WBPaper00059987:Wounding_upregulated
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060273:isp-1(qm150)_upregulated
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060871:M.humicola-extract_1h_regulated
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00060909:atfs-1(et18)_downregulated
WBPaper00061007:M.braciatum_upregulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061007:X.citri_upregulated
WBPaper00061081:E.faecalis_upregulated_N2
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061274:hypergravity_15xg_upregulated
WBPaper00061340:Anterior_arcade_cell
WBPaper00061340:Intestine
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061439:unc-30(ok613)_downregulated
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061527:pqn-54-abu-9
WBPaper00061753:csr-1(tor159)_upregulated_25C
WBPaper00061952:daf-18(nr2037)_upregulated
WBPaper00061995:mter-4(syb3662syb3403)_downregulated
WBPaper00062156:jmjd-1.2(zr1010)_upregulated
WBPaper00062156:jmjd-5(zr1234)_upregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062440:crh-1(n3315)_downregulated
WBPaper00062456:doxycycline_upregulated_N2_transcript
WBPaper00062534:fat-P-80_downregulated
WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
WBPaper00062672:let-418(n3536)dcp-66(RNAi)_upregulated
WBPaper00064071:NHR-49_interacting
WBPaper00064107:lin-35(n745)_downregulated
WBPaper00064229:B.thuringiensis-Cry5Ba_upregulated
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064539:nhr-114(gk849)_downregulated
WBPaper00064661:lpd-3(ok2138)_upregulated
WBPaper00064728:cpl-1(W32AY35A)_upregulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065096:npr-8(ok1439)_downregulated_Day10_25C
WBPaper00065258:anchor-cell_depleted
WBPaper00065560:E.coli-HB101_downregulated_F3
WBPaper00065746:eat-2(ad1113)_downregulated
WBPaper00065749:endu-2(tm4977)_upregulated
WBPaper00065841:9_1
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066093:E.coli-purE_upregulated
WBPaper00066110:Doxorubicin_upregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00005124:progesterone_10-5M_regulated
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00031003:hlh_1_enriched
WBPaper00032948:FedUp
WBPaper00036130:mir-243_up_regulated
WBPaper00036286:Pattern_G
WBPaper00038172:aak-2overexpression_up_regulated
WBPaper00038172:crh-1null_down_regulated
WBPaper00040210:Chlorpyrifos_24C_regulated
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_developing
WBPaper00040876:mir-35_downregulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_EtBr-exposed_51h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00045437:Toxic-Se_downregulated
WBPaper00045673:colistin_upregulated
WBPaper00045960:L1-L4-lethargus_upregulated
WBPaper00045960:L4-lethargus_upregulated
WBPaper00046083:oga-1(ok1207)_OP50_downregulated
WBPaper00046083:ogt-1(ok1474)_OP50_downregulated
WBPaper00046083:pmk-1(km25)_OP50_downregulated
WBPaper00047070:N2_UV_downregulated
WBPaper00047070:xpa-1_UV_downregulated
WBPaper00048989:N2_rapamycin_upregulated
WBPaper00056330:mrps-5(RNAi)_upregulated
[cgc6390]:Cluster_C
Interaction (120)
Map_infoPositivePositive_cloneM02G9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII2.42066
ReferenceWBPaper00026929
WBPaper00064648
MethodGene