WormBase Tree Display for Gene: WBGene00010774

WBGene00010774 SMap: S_parent: Sequence: K11E4
  Identity: Version: 2
    Name: CGC_name: shc-3 Person_evidence: WBPerson3668
          Laboratory_evidence: LMN
      Sequence_name: K11E4.2
      Molecular_name: K11E4.2a
        K11E4.2a.1
        CE34056
        K11E4.2b
        CE54562
        K11E4.2b.1
      Other_name: K11E4.2
        CELE_K11E4.2 Accession_evidence: NDB BX284606
      Public_name: shc-3
    DB_info: Database: AceView gene XO337
        WormQTL gene WBGene00010774
        WormFlux gene WBGene00010774
        NDB locus_tag CELE_K11E4.2
        NCBI gene 187296
        RefSeq protein NM_077894.7
            NM_001420579.1
        TrEMBL UniProtAcc Q21429
            A0A9J5HVD6
        UniProt_GCRP UniProtAcc Q21429
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 03 Oct 2022 14:55:54 WBPerson21950 Name_change: CGC_name: shc-3
                Other_name: K11E4.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: shc
    Allele (40)
    RNASeq_FPKM (74)
    Ortholog (16)
    Structured_description: Automated_description: Enriched in ABplapaaap; ABprapaaap; URX; dopaminergic neurons; and intestine based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including dpy-10; elt-2; and pgl-1 based on microarray and RNA-seq studies. Is affected by ten chemicals including stavudine; Zidovudine; and Cadmium Chloride based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SH2 domain superfamily and SH2 domain. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K11E4.2a
      K11E4.2b
    Corresponding_CDS_history: K11E4.2:wp101
    Corresponding_transcript: K11E4.2a.1
      K11E4.2b.1
    Associated_feature: WBsf648688
      WBsf717393
      WBsf236604
      WBsf236605
  Experimental_info: RNAi_result: WBRNAi00050603 Inferred_automatically: RNAi_primary
      WBRNAi00034288 Inferred_automatically: RNAi_primary
      WBRNAi00060437 Inferred_automatically: RNAi_primary
      WBRNAi00017014 Inferred_automatically: RNAi_primary
      WBRNAi00060439 Inferred_automatically: RNAi_primary
      WBRNAi00060438 Inferred_automatically: RNAi_primary
      WBRNAi00060440 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr3617
      Expr1023353
      Expr1154311
      Expr2005067
      Expr2023287
    Drives_construct: WBCnstr00031157
    Construct_product: WBCnstr00011542
      WBCnstr00031157
    Microarray_results (18)
    Expression_cluster (117)
    Interaction: WBInteraction000291449
      WBInteraction000367614
      WBInteraction000377861
      WBInteraction000382359
      WBInteraction000407100
      WBInteraction000411754
      WBInteraction000425784
      WBInteraction000445810
      WBInteraction000459988
  Map_info: Map: X Position: 14.4492
    Positive: Positive_clone: K11E4 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00062854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene