WormBase Tree Display for Gene: WBGene00010736
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| WBGene00010736 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | istr-1 | Person_evidence | WBPerson3188 | |||||
| Sequence_name | K10C8.3 | ||||||||
| Molecular_name | K10C8.3a | ||||||||
| K10C8.3a.1 | |||||||||
| CE31969 | |||||||||
| K10C8.3b | |||||||||
| CE41145 | |||||||||
| K10C8.3c | |||||||||
| CE06169 | |||||||||
| K10C8.3b.1 | |||||||||
| K10C8.3c.1 | |||||||||
| Other_name | CELE_K10C8.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | istr-1 | ||||||||
| DB_info | Database | AceView | gene | 5N183 | |||||
| WormQTL | gene | WBGene00010736 | |||||||
| WormFlux | gene | WBGene00010736 | |||||||
| NDB | locus_tag | CELE_K10C8.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010736|UniProtKB=G5ECX8 | |||||||
| family | PTHR12161 | ||||||||
| NCBI | gene | 179737 | |||||||
| RefSeq | protein | NM_001129502.4 | |||||||
| NM_001129503.3 | |||||||||
| NM_073769.7 | |||||||||
| TREEFAM | TREEFAM_ID | TF314258 | |||||||
| TrEMBL | UniProtAcc | G5EDV6 | |||||||
| A5Z2T4 | |||||||||
| G5ECX8 | |||||||||
| UniProt_GCRP | UniProtAcc | G5ECX8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 08 Aug 2013 16:41:57 | WBPerson2970 | Name_change | CGC_name | istr-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | istr | ||||||||
| Allele (93) | |||||||||
| Strain | WBStrain00003365 | ||||||||
| WBStrain00034975 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00004956 | ||||||||
| 00118081 | |||||||||
| Contained_in_operon | CEOP5364 | ||||||||
| Ortholog (39) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in protein localization. Is an ortholog of human IST1 (IST1 factor associated with ESCRT-III). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K10C8.3a | |||||||
| K10C8.3b | |||||||||
| K10C8.3c | |||||||||
| Corresponding_CDS_history | K10C8.3:wp87 | ||||||||
| Corresponding_transcript | K10C8.3a.1 | ||||||||
| K10C8.3b.1 | |||||||||
| K10C8.3c.1 | |||||||||
| Other_sequence (50) | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00034247 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00050505 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1176 | ||||||||
| Expr6381 | |||||||||
| Expr1017607 | |||||||||
| Expr1034701 | |||||||||
| Expr1154216 | |||||||||
| Expr1200259 | |||||||||
| Expr2012872 | |||||||||
| Expr2031106 | |||||||||
| Drives_construct | WBCnstr00003836 | ||||||||
| WBCnstr00031185 | |||||||||
| Construct_product | WBCnstr00031185 | ||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (132) | |||||||||
| Interaction (36) | |||||||||
| Map_info | Map | V | Position | 4.61343 | |||||
| Positive | Positive_clone | K10C8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00041771 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061547 | |||||||||
| WBPaper00062371 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
