WormBase Tree Display for Gene: WBGene00010699
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| WBGene00010699 | SMap | S_parent | Sequence | K08H10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | trpp-6 | Person_evidence | WBPerson3188 | |||||
| Sequence_name | K08H10.9 | ||||||||
| Molecular_name | K08H10.9 | ||||||||
| K08H10.9.1 | |||||||||
| CE18881 | |||||||||
| Other_name | CELE_K08H10.9 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | trpp-6 | ||||||||
| DB_info | Database | AceView | gene | 5K473 | |||||
| WormQTL | gene | WBGene00010699 | |||||||
| WormFlux | gene | WBGene00010699 | |||||||
| NDB | locus_tag | CELE_K08H10.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010699|UniProtKB=Q9XU81 | |||||||
| family | PTHR12817 | ||||||||
| NCBI | gene | 179394 | |||||||
| RefSeq | protein | NM_073170.7 | |||||||
| TREEFAM | TREEFAM_ID | TF313010 | |||||||
| TrEMBL | UniProtAcc | Q9XU81 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XU81 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 08 Aug 2013 16:41:57 | WBPerson2970 | Name_change | CGC_name | trpp-6 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | trpp | ||||||||
| Allele (15) | |||||||||
| Strain | WBStrain00055491 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00101565 | ||||||||
| 00101566 | |||||||||
| 00101567 | |||||||||
| 00101568 | |||||||||
| 00101569 | |||||||||
| 00118032 | |||||||||
| 00118033 | |||||||||
| Ortholog (36) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport. Predicted to be located in cis-Golgi network and trans-Golgi network. Predicted to be part of TRAPP complex. Is an ortholog of human TRAPPC6B (trafficking protein particle complex subunit 6B). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K08H10.9 | |||||||
| Corresponding_transcript | K08H10.9.1 | ||||||||
| Other_sequence (26) | |||||||||
| Associated_feature | WBsf647123 | ||||||||
| WBsf232313 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00062530 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00034167 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00050350 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014471 | ||||||||
| Expr1034681 | |||||||||
| Expr1154053 | |||||||||
| Expr2017513 | |||||||||
| Expr2035652 | |||||||||
| Drives_construct | WBCnstr00031210 | ||||||||
| Construct_product | WBCnstr00031210 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (102) | |||||||||
| Interaction (25) | |||||||||
| Map_info | Map | V | Position | 2.22871 | |||||
| Positive | Positive_clone | K08H10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060970 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
