WormBase Tree Display for Gene: WBGene00010675
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| WBGene00010675 | SMap | S_parent | Sequence | K08E7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | K08E7.8 | |||||||
| Molecular_name | K08E7.8a | ||||||||
| K08E7.8a.1 | |||||||||
| CE11930 | |||||||||
| K08E7.8b | |||||||||
| CE39748 | |||||||||
| K08E7.8b.1 | |||||||||
| Other_name | CELE_K08E7.8 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | K08E7.8 | ||||||||
| DB_info | Database | AceView | gene | 4N350 | |||||
| WormQTL | gene | WBGene00010675 | |||||||
| WormFlux | gene | WBGene00010675 | |||||||
| NDB | locus_tag | CELE_K08E7.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010675|UniProtKB=Q21347 | |||||||
| family | PTHR16083 | ||||||||
| NCBI | gene | 178213 | |||||||
| RefSeq | protein | NM_001047504.6 | |||||||
| NM_001047505.3 | |||||||||
| TREEFAM | TREEFAM_ID | TF319816 | |||||||
| TrEMBL | UniProtAcc | Q21347 | |||||||
| Q2EEN9 | |||||||||
| UniProt_GCRP | UniProtAcc | Q21347 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (13) | |||||||||
| Strain | WBStrain00002510 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (34) | |||||||||
| Structured_description | Automated_description | Enriched in intestine; muscle cell; and somatic gonad precursor based on Chronogram; tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; dpy-10; and hsf-1 based on RNA-seq and microarray studies. Is affected by eight chemicals including Zidovudine; Rifampin; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Leucine-rich repeat; Leucine-rich repeat domain superfamily; and Leucine rich repeat. Is an ortholog of human LRRC20 (leucine rich repeat containing 20). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K08E7.8a | |||||||
| K08E7.8b | |||||||||
| Corresponding_transcript | K08E7.8a.1 | ||||||||
| K08E7.8b.1 | |||||||||
| Other_sequence | HC07104 | ||||||||
| Tcol_isotig14701 | |||||||||
| Oden_isotig13750 | |||||||||
| Associated_feature | WBsf652304 | ||||||||
| WBsf998164 | |||||||||
| WBsf998165 | |||||||||
| WBsf998166 | |||||||||
| WBsf998167 | |||||||||
| WBsf1018396 | |||||||||
| WBsf231040 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00050310 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00016819 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034148 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1632 | ||||||||
| Expr6367 | |||||||||
| Expr1023181 | |||||||||
| Expr1154011 | |||||||||
| Expr2004934 | |||||||||
| Expr2023156 | |||||||||
| Drives_construct | WBCnstr00003090 | ||||||||
| WBCnstr00031231 | |||||||||
| Construct_product | WBCnstr00031231 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (98) | |||||||||
| Map_info | Positive | Positive_clone | K08E7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 6.06356 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
