WormBase Tree Display for Gene: WBGene00010629
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| WBGene00010629 | SMap | S_parent | Sequence | K07C5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | sluh-7 | |||||||
| Sequence_name | K07C5.6 | ||||||||
| Molecular_name | K07C5.6 | ||||||||
| K07C5.6.1 | |||||||||
| CE06116 | |||||||||
| Other_name | CELE_K07C5.6 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | sluh-7 | ||||||||
| DB_info | Database | AceView | gene | 5K834 | |||||
| WormQTL | gene | WBGene00010629 | |||||||
| WormFlux | gene | WBGene00010629 | |||||||
| NDB | locus_tag | CELE_K07C5.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010629|UniProtKB=Q21278 | |||||||
| family | PTHR12942 | ||||||||
| NCBI | gene | 179443 | |||||||
| RefSeq | protein | NM_073260.6 | |||||||
| SwissProt | UniProtAcc | Q21278 | |||||||
| TREEFAM | TREEFAM_ID | TF105691 | |||||||
| UniProt_GCRP | UniProtAcc | Q21278 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 17 Mar 2020 15:50:07 | WBPerson1987 | Name_change | CGC_name | sluh-7 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sluh | ||||||||
| Allele (37) | |||||||||
| Strain | WBStrain00051313 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Ortholog (37) | |||||||||
| Structured_description | Automated_description | Predicted to enable enzyme binding activity; pre-mRNA 3'-splice site binding activity; and zinc ion binding activity. Predicted to be involved in RNA splicing. Predicted to be located in cytoplasm and nucleus. Predicted to be part of spliceosomal complex. Is an ortholog of human SLU7 (SLU7 homolog, splicing factor). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K07C5.6 | |||||||
| Corresponding_transcript | K07C5.6.1 | ||||||||
| Other_sequence (73) | |||||||||
| Associated_feature | WBsf655589 | ||||||||
| WBsf669304 | |||||||||
| WBsf234383 | |||||||||
| Experimental_info | RNAi_result (20) | ||||||||
| Expr_pattern | Expr1028220 | ||||||||
| Expr1034645 | |||||||||
| Expr1153835 | |||||||||
| Expr2004853 | |||||||||
| Expr2023074 | |||||||||
| Drives_construct | WBCnstr00031272 | ||||||||
| Construct_product | WBCnstr00031272 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (139) | |||||||||
| Interaction (132) | |||||||||
| Map_info | Map | V | Position | 2.51017 | |||||
| Positive | Positive_clone | K07C5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00048493 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00058224 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
