WormBase Tree Display for Gene: WBGene00010628

WBGene00010628 SMap: S_parent: Sequence: K07C5
  Identity: Version: 2
    Name: CGC_name: ceeh-2
      Sequence_name: K07C5.5
      Molecular_name: K07C5.5
        K07C5.5.1
        CE06115
      Other_name: CELE_K07C5.5 Accession_evidence: NDB BX284605
      Public_name: ceeh-2
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 22 Feb 2008 11:36:26 WBPerson2970 Name_change: CGC_name: ceeh-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ceeh
    Allele (20)
    RNASeq_FPKM (74)
    GO_annotation: 00014212
      00014213
      00014214
      00014215
      00014216
      00014217
      00014218
      00014219
      00117983
    Ortholog: WBGene00031153 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00065089 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00159493 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00121491 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00093311 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
      WBGene00132176 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      CBOVI.g12147 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g6358 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g16441 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g4415 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g18012 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g7549 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g512 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g764 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g825 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g2239 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00175.g6248 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-ceeh-2 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold502.g2329 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_03315.g29780 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_11740 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_016375 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g16962 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50288800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g15497 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00272071 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00261081 Strongyloides ratti From_analysis: WormBase-Compara
      ZFIN:ZDB-GENE-080227-1 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:23760 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:23758 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1919182 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:2686228 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1308891 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      RGD:1307206 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog (14)
    Structured_description: Concise_description: ceeh-2 encodes a soluble epoxide hydrolase (sEH) orthologous to human ABHD7 and ABHD9; recombinant CEEH-2 is biochemically active in vitro on epoxyeicosatrienoic acids and leukotoxins (EpOMEs); conversely, CEEH-2 is inhibited by urea-based antagonists of mammalian sEH that elevate EpOME levels when fed to C. elegans; perhaps because of genetic redundancy with its paralog CEEH-1, CEEH-2 has no obvious function in mass RNAi assays. Paper_evidence: WBPaper00031511
          Curator_confirmed: WBPerson567
          Date_last_updated: 02 Mar 2008 00:00:00
      Automated_description: Enables epoxide hydrolase activity. Involved in cellular lipid metabolic process. Is an ortholog of human EPHX3 (epoxide hydrolase 3) and EPHX4 (epoxide hydrolase 4). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K07C5.5
    Corresponding_CDS_history: K07C5.5b:wp260
    Corresponding_transcript: K07C5.5.1
    Other_sequence (16)
    Associated_feature: WBsf669305
      WBsf669306
      WBsf669307
      WBsf234384
  Experimental_info: RNAi_result: WBRNAi00016706 Inferred_automatically: RNAi_primary
      WBRNAi00050134 Inferred_automatically: RNAi_primary
      WBRNAi00050133 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1019102
      Expr1153834
      Expr2009856
      Expr2028096
    Drives_construct: WBCnstr00031273
    Construct_product: WBCnstr00031273
    Microarray_results (19)
    Expression_cluster (150)
    Interaction (42)
  Map_info: Map: V Position: 2.51041 Error: 0.000836
    Positive: Positive_clone: K07C5 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00031511
    WBPaper00038491
    WBPaper00042257
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene