WormBase Tree Display for Gene: WBGene00010620

WBGene00010620 SMap: S_parent: Sequence: K07A12
  Identity: Version: 1
    Name: Sequence_name: K07A12.1
      Molecular_name: K07A12.1
        K07A12.1.1
        CE46746
      Other_name: CELE_K07A12.1 Accession_evidence: NDB BX284601
      Public_name: K07A12.1
    DB_info: Database: AceView gene 1J245
        WormQTL gene WBGene00010620
        WormFlux gene WBGene00010620
        NDB locus_tag CELE_K07A12.1
        Panther gene CAEEL|WormBase=WBGene00010620|UniProtKB=P90919
          family PTHR22684
        NCBI gene 172669
        RefSeq protein NM_059946.7
        TREEFAM TREEFAM_ID TF106155
        TrEMBL UniProtAcc P90919
        UniProt_GCRP UniProtAcc P90919
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (41)
    RNASeq_FPKM (74)
    GO_annotation: 00049501
      00049502
    Contained_in_operon: CEOP1496
    Ortholog: WBGene00035253 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00060397 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00193724 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00135254 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00219405 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00233089 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g9653 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g5781 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g14520 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g14390 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g6759 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g7639 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g14989 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g2643 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g15272 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g11836 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00152.g5708 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-K07A12.1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g22309 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00880.g16403 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_04851.g33884 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_14704 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_001270 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g06947 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g22359 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10301200 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g1644 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00237832 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00260548 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00290939 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000002741 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      FB:FBgn0027549 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040905-2 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      HGNC:29181 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      MGI:1914105 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      RGD:1309054 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
    Structured_description: Automated_description: Predicted to be located in cytoplasm. Predicted to be part of RQC complex. Is an ortholog of human TCF25 (transcription factor 25). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K07A12.1
    Corresponding_CDS_history: K07A12.1:wp229
    Corresponding_transcript: K07A12.1.1
    Other_sequence (28)
    Associated_feature: WBsf656650
      WBsf218192
  Experimental_info: RNAi_result: WBRNAi00002377 Inferred_automatically: RNAi_primary
      WBRNAi00034036 Inferred_automatically: RNAi_primary
      WBRNAi00050095 Inferred_automatically: RNAi_primary
      WBRNAi00116969 Inferred_automatically: RNAi_primary
      WBRNAi00003948 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1028999
      Expr1034638
      Expr1153797
      Expr2004836
      Expr2023057
    Drives_construct: WBCnstr00031281
    Construct_product: WBCnstr00031281
    Microarray_results (19)
    Expression_cluster (98)
    SAGE_tag (17)
    Interaction (11)
  Map_info: Positive: Positive_clone: K07A12 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I 3.01709
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00064339
  Method: Gene