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WormBase Tree Display for Gene: WBGene00010579

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Name Class

WBGene00010579SMapS_parentSequenceK05C4
IdentityVersion1
NameSequence_nameK05C4.2
Molecular_nameK05C4.2
K05C4.2.1
CE19970
K05C4.2.2
Other_nameCELE_K05C4.2Accession_evidenceNDBBX284601
Public_nameK05C4.2
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:51WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (36)
StrainWBStrain00036455
RNASeq_FPKM (74)
GO_annotation00102111
00102112
00102113
00102114
00102115
00102116
00117928
00117929
Contained_in_operonCEOP1752
OrthologWBGene00038912Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00060832Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00157023Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00133015Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00225087Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g10379Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g16319Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g441Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g8315Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g13430Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g22992Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP38.g7625Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g25125Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g10754Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00119.g4886Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-K05C4.2Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g19004Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00247.g7909Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_02675.g27494Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_09190Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_001513Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g06241Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g10896Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10002620Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g2949Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00238421Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00092732Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00259528Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00291361Trichuris murisFrom_analysisWormBase-Compara
FB:FBgn0037374Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-040801-103Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-041010-80Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:26926Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1915017Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1565488Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
Structured_descriptionAutomated_descriptionPredicted to be involved in endoplasmic reticulum organization and vesicle-mediated transport. Predicted to be located in endoplasmic reticulum membrane. Human ortholog(s) of this gene implicated in severe congenital neutropenia 6. Is an ortholog of human JAGN1 (jagunal homolog 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0112134Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:26926)
Molecular_infoCorresponding_CDSK05C4.2
Corresponding_transcriptK05C4.2.1
K05C4.2.2
Other_sequence (29)
Associated_featureWBsf649774
Experimental_infoRNAi_resultWBRNAi00073189Inferred_automaticallyRNAi_primary
WBRNAi00073188Inferred_automaticallyRNAi_primary
WBRNAi00003927Inferred_automaticallyRNAi_primary
WBRNAi00003926Inferred_automaticallyRNAi_primary
WBRNAi00033506Inferred_automaticallyRNAi_primary
WBRNAi00025880Inferred_automaticallyRNAi_primary
WBRNAi00049972Inferred_automaticallyRNAi_primary
WBRNAi00049973Inferred_automaticallyRNAi_primary
WBRNAi00033982Inferred_automaticallyRNAi_primary
WBRNAi00025879Inferred_automaticallyRNAi_primary
Expr_patternExpr1023183
Expr1034619
Expr1153668
Expr2004785
Expr2023008
Microarray_results (38)
Expression_cluster (127)
InteractionWBInteraction000417926
WBInteraction000438021
WBInteraction000570873
WBInteraction000579697
WBInteraction000582647
Map_infoPositivePositive_cloneK05C4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionI26.4727
ReferenceWBPaper00038491
WBPaper00049828
WBPaper00049977
WBPaper00055090
WBPaper00056554
MethodGene