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WormBase Tree Display for Gene: WBGene00010571

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Name Class

WBGene00010571SMapS_parentSequenceK04G11
IdentityVersion1
NameSequence_nameK04G11.3
Molecular_nameK04G11.3
K04G11.3.1
CE11746
Other_nameCELE_K04G11.3Accession_evidenceNDBBX284606
Public_nameK04G11.3
DB_infoDatabaseAceViewgeneXO960
WormQTLgeneWBGene00010571
WormFluxgeneWBGene00010571
NDBlocus_tagCELE_K04G11.3
NCBIgene187011
RefSeqproteinNM_077992.5
TREEFAMTREEFAM_IDTF342966
TrEMBLUniProtAccQ93845
UniProt_GCRPUniProtAccQ93845
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:51WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (42)
RNASeq_FPKM (74)
OrthologWBGene00033974Caenorhabditis briggsaeFrom_analysisOrthoMCL
WormBase-Compara
WBGene00066160Caenorhabditis remaneiFrom_analysisInparanoid_8
CSP26.g8931Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g11359Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g11361Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g19217Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g16813Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g16814Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g4970Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP32.g10682Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g13149Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g15300Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g15301Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g16006Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g21406Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g22543Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g8568Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g18999Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cnig_chr_III.g9744Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold596.g5296Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00150.g5708Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_18197Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_003950Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrX_pilon.g20565Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00055900Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00070989Caenorhabditis remaneiFrom_analysisWormBase-Compara
ParalogWBGene00004681Caenorhabditis elegansFrom_analysisTreeFam
WBGene00009943Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in intestine and rectal gland cell based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including skn-1; hsf-1; and pgl-1 based on microarray and RNA-seq studies. Is affected by six chemicals including stavudine; Zidovudine; and paraquat based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: RSD-2 N-terminal domain and RSD-2, N-terminal.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_info (3)
Experimental_infoRNAi_resultWBRNAi00049928Inferred_automaticallyRNAi_primary
WBRNAi00016606Inferred_automaticallyRNAi_primary
WBRNAi00033960Inferred_automaticallyRNAi_primary
Expr_patternExpr1026666
Expr1153633
Expr2004772
Expr2022995
Drives_constructWBCnstr00031315
Construct_productWBCnstr00031315
Microarray_results (14)
Expression_cluster (74)
Map_infoPositivePositive_cloneK04G11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX16.6924
MethodGene