WormBase Tree Display for Gene: WBGene00010566

WBGene00010566 SMap: S_parent: Sequence: K04G2
  Identity: Version: 1
    Name: Sequence_name: K04G2.7
      Molecular_name: K04G2.7a
        K04G2.7a.1
        CE38203
        K04G2.7b
        CE42485
        K04G2.7b.1
      Other_name: CELE_K04G2.7 Accession_evidence: NDB BX284601
      Public_name: K04G2.7
    DB_info: Database: AceView gene 1I622
        WormQTL gene WBGene00010566
        WormFlux gene WBGene00010566
        NDB locus_tag CELE_K04G2.7
        NCBI gene 187007
        RefSeq protein NM_001129020.3
            NM_059815.4
        TrEMBL UniProtAcc Q21226
            B2D6N0
        UniProt_GCRP UniProtAcc Q21226
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (24)
    Strain: WBStrain00032152
    RNASeq_FPKM (74)
    Ortholog: WBGene00030060 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00137947 Caenorhabditis japonica From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00157533 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00213662 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00070009 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
      CBOVI.g10244 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g19095 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g7929 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g4840 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g12318 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g16914 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP32.g8288 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g7786 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g851 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g16934 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-K04G2.7 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g7799 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00160.g5964 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_13197 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_000445 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_10063200 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g1514 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in AFD; MSpaaapa; mechanosensory neurons; and somatic gonad precursor based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on RNA-seq and microarray studies. Is affected by nine chemicals including allantoin; Sirolimus; and Rifampin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Tc5 transposase DNA-binding domain; Homeobox-like domain superfamily; and HTH CenpB-type DNA-binding domain. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K04G2.7a
      K04G2.7b
    Corresponding_CDS_history: K04G2.7:wp140
    Corresponding_transcript: K04G2.7a.1
      K04G2.7b.1
    Associated_feature: WBsf649367
      WBsf663772
      WBsf664510
      WBsf664511
      WBsf984336
      WBsf984337
      WBsf1010185
  Experimental_info: RNAi_result: WBRNAi00033967 Inferred_automatically: RNAi_primary
      WBRNAi00049940 Inferred_automatically: RNAi_primary
      WBRNAi00003921 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1018560
      Expr1034614
      Expr1153645
      Expr2004776
      Expr2022999
    Drives_construct: WBCnstr00031320
    Construct_product: WBCnstr00031320
    Microarray_results (19)
    Expression_cluster (110)
    Interaction: WBInteraction000178248
      WBInteraction000255327
      WBInteraction000308856
      WBInteraction000381600
      WBInteraction000388643
      WBInteraction000415362
      WBInteraction000417758
      WBInteraction000431132
      WBInteraction000448001
      WBInteraction000452520
  Map_info: Positive: Positive_clone: K04G2 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I 2.43587
  Method: Gene