WormBase Tree Display for Gene: WBGene00010566

WBGene00010566 SMap: S_parent: Sequence: K04G2
  Identity: Version: 1
    Name: Sequence_name: K04G2.7
      Molecular_name: K04G2.7a
        K04G2.7a.1
        CE38203
        K04G2.7b
        CE42485
        K04G2.7b.1
      Other_name: CELE_K04G2.7 Accession_evidence: NDB BX284601
      Public_name: K04G2.7
    DB_info: Database: AceView gene 1I622
        WormQTL gene WBGene00010566
        WormFlux gene WBGene00010566
        NDB locus_tag CELE_K04G2.7
        NCBI gene 187007
        RefSeq protein NM_001129020.3
            NM_059815.4
        TrEMBL UniProtAcc Q21226
            B2D6N0
        UniProt_GCRP UniProtAcc Q21226
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (24)
    Strain: WBStrain00032152
    RNASeq_FPKM (74)
    Ortholog (22)
    Structured_description: Automated_description: Enriched in AFD; MSpaaapa; mechanosensory neurons; and somatic gonad precursor based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on RNA-seq and microarray studies. Is affected by nine chemicals including allantoin; Sirolimus; and Rifampin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Tc5 transposase DNA-binding domain; Homeobox-like domain superfamily; and HTH CenpB-type DNA-binding domain. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K04G2.7a
      K04G2.7b
    Corresponding_CDS_history: K04G2.7:wp140
    Corresponding_transcript: K04G2.7a.1
      K04G2.7b.1
    Associated_feature: WBsf649367
      WBsf663772
      WBsf664510
      WBsf664511
      WBsf984336
      WBsf984337
      WBsf1010185
  Experimental_info: RNAi_result: WBRNAi00033967 Inferred_automatically: RNAi_primary
      WBRNAi00049940 Inferred_automatically: RNAi_primary
      WBRNAi00003921 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1018560
      Expr1034614
      Expr1153645
      Expr2004776
      Expr2022999
    Drives_construct: WBCnstr00031320
    Construct_product: WBCnstr00031320
    Microarray_results (19)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_upregulated
      WBPaper00036375:enriched_in_PVD_OLL
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
      WBPaper00044736:flat_dev_expression
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
      WBPaper00045257:bar-1(ga80)_downregulated
      WBPaper00045316:prg-1_upregulated_L4
      WBPaper00045390:ubc-9(RNAi)_upregulated
      WBPaper00046012:tdp-1(ok803)_upregulated
      WBPaper00047131:daf-2(e1370)_upregulated_N2-background
      WBPaper00048690:hermaphrodite-Z1-Z4_enriched
      WBPaper00048690:male-Z1-Z4_enriched
      WBPaper00048971:daf-16(mgDf50)_downregulated_L1
      WBPaper00048988:neuron_expressed
      WBPaper00049942:hsf-1(RNAi)_downregulated
      WBPaper00050163:chd-3(eh4);let-418(RNAi)_upregulated_24-cell-embryo
      WBPaper00050163:chd-3(eh4)_upregulated_24-cell-embryo
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050344:PLM-neuron_enriched
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050801:DAF-12_dauer_regulome
      WBPaper00050801:DAF-16_dauer_regulome
      WBPaper00050801:DPY-21_dauer_regulome
      WBPaper00050990:body-muscle_enriched
      WBPaper00050990:body-muscle_expressed
      WBPaper00051404:alg-1(gk214)_downregulated
      WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
      WBPaper00053388:dauer_regulated_Cluster5
      WBPaper00054758:alg-1(gk204)_upregulated
      WBPaper00055013:hmg-3(bar24)_downregulated
      WBPaper00055334:DLC-1_interacting
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Rapamycin-Allantoin_downregulated
      WBPaper00055354:Rifampicin-Allantoin_downregulated
      WBPaper00055386:daf-2(e1370)_upregulated
      WBPaper00055827:daf-2(e1370)_upregulated
      WBPaper00055971:nhl-2(ok818)_25C_downregulated
      WBPaper00056169:rrf-3(pk1426)_downregulated_L4
      WBPaper00056290:hsp-6(mg585)_upregulated
      WBPaper00056330:glycine_downregulated
      WBPaper00056471:S.aureus-4h_downregulated_N2
      WBPaper00056826:SGP_biased
      WBPaper00057068:numr-1(RNAi)_downregulated
      WBPaper00058725:sftb-1(cer6)_downregulated
      WBPaper00058725:sftb-1(cer39)_upregulated
      WBPaper00059027:neuron-synapses_depleted
      WBPaper00059253:sucrose_stearic-acid_upregulated
      WBPaper00059253:sucrose_upregulated
      WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
      WBPaper00059728:5ug_cholesterol_upregulated
      WBPaper00059728:20ug_cholesterol_upregulated
      WBPaper00060445:ikb-1(nr2027)_downregulated_L4
      WBPaper00060445:nfki-1(cer1)_downregulated_L4
      WBPaper00060459:bcat-1(RNAi)_upregulated
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00060886:spr-5(by101);met-2(n4256)_upregulated
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00061340:Neuroblast_I6_M5
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061424:Diet_MYb120_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061527:acy-2-F35C5.11
      WBPaper00061530:nhr-49(e2144)_downregulated
      WBPaper00061699:daf-18(ok480)_downregulated
      WBPaper00061753:csr-1(tor159)_upregulated_25C
      WBPaper00062056:lin-35(n745)_downregulated
      WBPaper00062146:MOG-7-degron_1h_regulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062446:nhr-8(hd117)_upregulated
      WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064637:cox-5B(RNAi)_upregulated
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065315:mating_upregulated_Day2-7
      WBPaper00065746:eat-2(ad1113)_downregulated
      WBPaper00065841:64_0
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      cgc4386_cluster_3_6
      cgc4489_group_22
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00026952:class_F
      WBPaper00035227:heat_shock_regulated
      WBPaper00036130:mir-243_up_regulated
      WBPaper00036286:Pattern_C
      WBPaper00040210:Chlorpyrifos_16C_regulated
      WBPaper00040210:Chlorpyrifos_24C_regulated
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00045015:nhr-25(RNAi)_downregulated
      WBPaper00047070:N2_starvation_downregulated
      WBPaper00048989:N2_rapamycin_upregulated
      WBPaper00053236:daf-16(mgDF50)_regulated_Starved
      WBPaper00055899:nitroguanidine_regulated
      WBPaper00056330:mrps-5(RNAi)_upregulated
      [cgc6390]:Cluster_A
    Interaction: WBInteraction000178248
      WBInteraction000255327
      WBInteraction000308856
      WBInteraction000381600
      WBInteraction000388643
      WBInteraction000415362
      WBInteraction000417758
      WBInteraction000431132
      WBInteraction000448001
      WBInteraction000452520
  Map_info: Positive: Positive_clone: K04G2 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I 2.43587
  Method: Gene