WormBase Tree Display for Gene: WBGene00010565
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| WBGene00010565 | SMap | S_parent | Sequence | K04G2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | vacl-14 | Person_evidence | WBPerson3240 | |||||
| Sequence_name | K04G2.6 | ||||||||
| Molecular_name | K04G2.6 | ||||||||
| K04G2.6.1 | |||||||||
| CE06100 | |||||||||
| Other_name | CELE_K04G2.6 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | vacl-14 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 31 Aug 2012 11:56:39 | WBPerson2970 | Name_change | CGC_name | vacl-14 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | vacl | ||||||||
| Allele (28) | |||||||||
| Strain | WBStrain00003373 | ||||||||
| WBStrain00036573 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00070798 | ||||||||
| 00070799 | |||||||||
| 00070800 | |||||||||
| 00070801 | |||||||||
| 00117923 | |||||||||
| 00117924 | |||||||||
| Ortholog (39) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in phosphatidylinositol biosynthetic process. Predicted to be located in endosome membrane. Predicted to be part of PAS complex. Human ortholog(s) of this gene implicated in striatonigral degeneration. Is an ortholog of human VAC14 (VAC14 component of PIKFYVE complex). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:4751 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:25507) | ||||
| Molecular_info | Corresponding_CDS | K04G2.6 | |||||||
| Corresponding_transcript | K04G2.6.1 | ||||||||
| Other_sequence (33) | |||||||||
| Associated_feature | WBsf643506 | ||||||||
| WBsf656596 | |||||||||
| WBsf656597 | |||||||||
| WBsf984334 | |||||||||
| WBsf1010184 | |||||||||
| WBsf218113 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00003920 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00049939 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram226 | ||||||||
| Expr1025063 | |||||||||
| Expr1034613 | |||||||||
| Expr1153644 | |||||||||
| Expr2017955 | |||||||||
| Expr2036091 | |||||||||
| Drives_construct | WBCnstr00003844 | ||||||||
| WBCnstr00031321 | |||||||||
| Construct_product | WBCnstr00031321 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (112) | |||||||||
| Interaction (68) | |||||||||
| Map_info | Map | I | Position | 2.43324 | |||||
| Positive | Positive_clone | K04G2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00046969 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061547 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
