WormBase Tree Display for Gene: WBGene00010507
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| WBGene00010507 | SMap | S_parent | Sequence | K02E2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | K02E2.6 | |||||||
| Molecular_name | K02E2.6 | ||||||||
| K02E2.6.1 | |||||||||
| CE23845 | |||||||||
| K02E2.6.2 | |||||||||
| K02E2.6.3 | |||||||||
| Other_name | CELE_K02E2.6 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | K02E2.6 | ||||||||
| DB_info | Database | AceView | gene | 5U851 | |||||
| WormQTL | gene | WBGene00010507 | |||||||
| WormFlux | gene | WBGene00010507 | |||||||
| NDB | locus_tag | CELE_K02E2.6 | |||||||
| NCBI | gene | 180335 | |||||||
| RefSeq | protein | NM_075526.8 | |||||||
| TrEMBL | UniProtAcc | Q9U3C4 | |||||||
| UniProt_GCRP | UniProtAcc | Q9U3C4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (45) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (14) | |||||||||
| Structured_description | Concise_description | K02E2.6 encodes a 123-residue protein resembling retroviral aspartyl proteases; K02E2.6 mRNAs are expressed somatically, and are normally lowered by DCR-1 and the DCR-1 interactors DRH-3, RRF-3, ERI-1, ERI-3, and ERI-5 (via degradation of K02E2.6 transcripts into small RNAs); K02E2.6 has no obvious function in mass RNAi assays. | Paper_evidence | WBPaper00027057 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 09 Oct 2008 00:00:00 | ||||||||
| Automated_description | Enriched in several structures, including MSpppaaa; head mesodermal cell; intestine; neurons; and retrovesicular ganglion based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including hsf-1; rrf-3; and sir-2.1 based on microarray and RNA-seq studies. Is affected by eight chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Aspartic peptidase domain superfamily and gag-polyprotein putative aspartyl protease. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K02E2.6 | |||||||
| Corresponding_transcript | K02E2.6.1 | ||||||||
| K02E2.6.2 | |||||||||
| K02E2.6.3 | |||||||||
| Associated_feature | WBsf647739 | ||||||||
| WBsf1003533 | |||||||||
| WBsf1021945 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00049722 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00016468 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033874 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022425 | ||||||||
| Expr1153444 | |||||||||
| Expr2004701 | |||||||||
| Expr2022923 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (151) | |||||||||
| Interaction | WBInteraction000175455 | ||||||||
| WBInteraction000196101 | |||||||||
| WBInteraction000203976 | |||||||||
| WBInteraction000261835 | |||||||||
| WBInteraction000504299 | |||||||||
| Map_info | Positive | Positive_clone | K02E2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 24.9905 | |||||||
| Reference | WBPaper00027057 | ||||||||
| WBPaper00032178 | |||||||||
| WBPaper00035199 | |||||||||
| Method | Gene |
