WormBase Tree Display for Gene: WBGene00010456

WBGene00010456 SMap: S_parent: Sequence: K01C8
  Identity: Version: 2
    Name: CGC_name: srdh-1 Person_evidence: WBPerson9055
            WBPerson55847
      Sequence_name: K01C8.1
      Molecular_name: K01C8.1
        K01C8.1.1
        CE36943
        K01C8.1.2
      Other_name: CELE_K01C8.1 Accession_evidence: NDB BX284602
      Public_name: srdh-1
    DB_info: Database: AceView gene 2I557
        WormQTL gene WBGene00010456
        WormFlux gene WBGene00010456
        NDB locus_tag CELE_K01C8.1
        Panther gene CAEEL|WormBase=WBGene00010456|UniProtKB=Q21080
          family PTHR48078
        NCBI gene 174326
        RefSeq protein NM_063340.5
        TREEFAM TREEFAM_ID TF314863
        TrEMBL UniProtAcc Q21080
        UniProt_GCRP UniProtAcc Q21080
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 27 Oct 2021 12:29:35 WBPerson1983 Name_change: CGC_name: srdh-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: srdh
    Allele (34)
    RNASeq_FPKM (74)
    GO_annotation: 00070245
      00070246
      00070247
      00070248
      00070249
      00070250
      00117863
      00117864
    Ortholog: WBGene00024026 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00053843 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00155181 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00112373 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00068117 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00132510 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      CBOVI.g6313 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g5946 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g38 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g17014 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g21818 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g16843 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g2007 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g5189 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g5190 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g9637 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g19309 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00064.g3151 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_05738.g19808 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-K01C8.1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g8234 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00320.g9351 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_08735 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_005040 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12550 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g9541 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20134700 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g5203 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00267294 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00287979 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0037684 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-110914-210 Danio rerio From_analysis: Inparanoid
            Panther
    Paralog (12)
    Structured_description: Automated_description: Predicted to enable L-serine ammonia-lyase activity and L-threonine ammonia-lyase activity. Predicted to be involved in L-serine catabolic process; isoleucine biosynthetic process; and threonine catabolic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K01C8.1
    Corresponding_CDS_history: K01C8.1:wp127
    Corresponding_transcript: K01C8.1.1
      K01C8.1.2
    Other_sequence (81)
    Associated_feature: WBsf657954
      WBsf657955
      WBsf988687
      WBsf1012663
      WBsf221724
      WBsf221725
  Experimental_info: RNAi_result: WBRNAi00033544 Inferred_automatically: RNAi_primary
      WBRNAi00075854 Inferred_automatically: RNAi_primary
      WBRNAi00016385 Inferred_automatically: RNAi_primary
      WBRNAi00049602 Inferred_automatically: RNAi_primary
      WBRNAi00033812 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1028087
      Expr1034561
      Expr1153333
      Expr2004642
      Expr2022870
    Drives_construct: WBCnstr00031406
    Construct_product: WBCnstr00031406
    Microarray_results (20)
    Expression_cluster (217)
    Interaction (119)
  Map_info: Map: II Position: 0.755243
    Positive: Positive_clone: K01C8 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (2)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene