WormBase Tree Display for Gene: WBGene00010456

WBGene00010456 SMap: S_parent: Sequence: K01C8
  Identity: Version: 2
    Name: CGC_name: srdh-1 Person_evidence: WBPerson9055
            WBPerson55847
      Sequence_name: K01C8.1
      Molecular_name: K01C8.1
        K01C8.1.1
        CE36943
        K01C8.1.2
      Other_name: CELE_K01C8.1 Accession_evidence: NDB BX284602
      Public_name: srdh-1
    DB_info: Database: AceView gene 2I557
        WormQTL gene WBGene00010456
        WormFlux gene WBGene00010456
        NDB locus_tag CELE_K01C8.1
        Panther gene CAEEL|WormBase=WBGene00010456|UniProtKB=Q21080
          family PTHR48078
        NCBI gene 174326
        RefSeq protein NM_063340.5
        TREEFAM TREEFAM_ID TF314863
        TrEMBL UniProtAcc Q21080
        UniProt_GCRP UniProtAcc Q21080
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 27 Oct 2021 12:29:35 WBPerson1983 Name_change: CGC_name: srdh-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: srdh
    Allele (34)
    RNASeq_FPKM (74)
    GO_annotation: 00070245
      00070246
      00070247
      00070248
      00070249
      00070250
      00117863
      00117864
    Ortholog (32)
    Paralog (12)
    Structured_description: Automated_description: Predicted to enable L-serine ammonia-lyase activity and L-threonine ammonia-lyase activity. Predicted to be involved in L-serine catabolic process; isoleucine biosynthetic process; and threonine catabolic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K01C8.1
    Corresponding_CDS_history: K01C8.1:wp127
    Corresponding_transcript: K01C8.1.1
      K01C8.1.2
    Other_sequence (81)
    Associated_feature: WBsf657954
      WBsf657955
      WBsf988687
      WBsf1012663
      WBsf221724
      WBsf221725
  Experimental_info: RNAi_result: WBRNAi00033544 Inferred_automatically: RNAi_primary
      WBRNAi00075854 Inferred_automatically: RNAi_primary
      WBRNAi00016385 Inferred_automatically: RNAi_primary
      WBRNAi00049602 Inferred_automatically: RNAi_primary
      WBRNAi00033812 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1028087
      Expr1034561
      Expr1153333
      Expr2004642
      Expr2022870
    Drives_construct: WBCnstr00031406
    Construct_product: WBCnstr00031406
    Microarray_results (20)
    Expression_cluster (217)
    Interaction: WBInteraction000029627
      WBInteraction000044255
      WBInteraction000046497
      WBInteraction000114544
      WBInteraction000117577
      WBInteraction000206092
      WBInteraction000217829
      WBInteraction000223902
      WBInteraction000225812
      WBInteraction000236913
      WBInteraction000237814
      WBInteraction000242689
      WBInteraction000247879
      WBInteraction000250221
      WBInteraction000256568
      WBInteraction000261410
      WBInteraction000262184
      WBInteraction000269066
      WBInteraction000269600
      WBInteraction000272900
      WBInteraction000277528
      WBInteraction000278961
      WBInteraction000288731
      WBInteraction000290284
      WBInteraction000292049
      WBInteraction000293058
      WBInteraction000300984
      WBInteraction000301028
      WBInteraction000301572
      WBInteraction000304082
      WBInteraction000307690
      WBInteraction000310437
      WBInteraction000310652
      WBInteraction000311048
      WBInteraction000319348
      WBInteraction000324547
      WBInteraction000325195
      WBInteraction000325507
      WBInteraction000326760
      WBInteraction000326767
      WBInteraction000327606
      WBInteraction000328110
      WBInteraction000329491
      WBInteraction000332175
      WBInteraction000334123
      WBInteraction000334249
      WBInteraction000335934
      WBInteraction000338888
      WBInteraction000338889
      WBInteraction000341971
      WBInteraction000345719
      WBInteraction000352444
      WBInteraction000355517
      WBInteraction000358627
      WBInteraction000363994
      WBInteraction000365112
      WBInteraction000369413
      WBInteraction000370144
      WBInteraction000372595
      WBInteraction000374130
      WBInteraction000376907
      WBInteraction000379838
      WBInteraction000385277
      WBInteraction000391359
      WBInteraction000391804
      WBInteraction000396670
      WBInteraction000399324
      WBInteraction000402952
      WBInteraction000403191
      WBInteraction000407076
      WBInteraction000411713
      WBInteraction000412088
      WBInteraction000412602
      WBInteraction000413861
      WBInteraction000413882
      WBInteraction000417247
      WBInteraction000418718
      WBInteraction000420646
      WBInteraction000421014
      WBInteraction000425914
      WBInteraction000426255
      WBInteraction000427487
      WBInteraction000427961
      WBInteraction000428463
      WBInteraction000428797
      WBInteraction000431856
      WBInteraction000431979
      WBInteraction000434017
      WBInteraction000436931
      WBInteraction000437292
      WBInteraction000438112
      WBInteraction000444897
      WBInteraction000445435
      WBInteraction000445816
      WBInteraction000447313
      WBInteraction000447517
      WBInteraction000448778
      WBInteraction000449197
      WBInteraction000450765
      WBInteraction000450966
      WBInteraction000459012
      WBInteraction000459546
      WBInteraction000467451
      WBInteraction000467452
      WBInteraction000472267
      WBInteraction000548368
      WBInteraction000549590
      WBInteraction000552787
      WBInteraction000563984
      WBInteraction000566150
      WBInteraction000566318
      WBInteraction000566597
      WBInteraction000567598
      WBInteraction000568252
      WBInteraction000574962
      WBInteraction000576181
      WBInteraction000576479
      WBInteraction000578471
      WBInteraction000583246
  Map_info: Map: II Position: 0.755243
    Positive: Positive_clone: K01C8 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene