WormBase Tree Display for Gene: WBGene00010407
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| WBGene00010407 | SMap | S_parent | Sequence | H19N07 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | scb-1 | |||||||
| Sequence_name | H19N07.3 | ||||||||
| Molecular_name | H19N07.3a | ||||||||
| H19N07.3a.1 | |||||||||
| CE16184 | |||||||||
| H19N07.3b | |||||||||
| CE45805 | |||||||||
| H19N07.3b.1 | |||||||||
| Other_name | CELE_H19N07.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | scb-1 | ||||||||
| DB_info | Database | AceView | gene | 5L598 | |||||
| WormQTL | gene | WBGene00010407 | |||||||
| WormFlux | gene | WBGene00010407 | |||||||
| NDB | locus_tag | CELE_H19N07.3 | |||||||
| NCBI | gene | 179539 | |||||||
| RefSeq | protein | NM_001392610.1 | |||||||
| NM_001269371.3 | |||||||||
| TrEMBL | UniProtAcc | E9P8A3 | |||||||
| O45625 | |||||||||
| UniProt_GCRP | UniProtAcc | O45625 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 13 Mar 2019 16:43:03 | WBPerson1983 | Name_change | CGC_name | scb-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | scb | ||||||||
| Allele (16) | |||||||||
| Possibly_affected_by | WBVar02153019 | ||||||||
| WBVar02153020 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00034866 | ||||||||
| Contained_in_operon | CEOP5272 | ||||||||
| Ortholog (20) | |||||||||
| Structured_description | Automated_description | Located in nucleus. Expressed in somatic cell. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | H19N07.3a | |||||||
| H19N07.3b | |||||||||
| Corresponding_transcript | H19N07.3a.1 | ||||||||
| H19N07.3b.1 | |||||||||
| Other_sequence | CBC00926_1 | ||||||||
| CBC02612_1 | |||||||||
| Associated_feature | WBsf234502 | ||||||||
| WBsf234503 | |||||||||
| WBsf234504 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00016281 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00049436 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033726 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr12807 | ||||||||
| Expr1016001 | |||||||||
| Expr1034539 | |||||||||
| Expr1153163 | |||||||||
| Expr2004563 | |||||||||
| Expr2022789 | |||||||||
| Drives_construct | WBCnstr00031436 | ||||||||
| Construct_product | WBCnstr00022788 | ||||||||
| WBCnstr00031436 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (176) | |||||||||
| Interaction | WBInteraction000354830 | ||||||||
| WBInteraction000402540 | |||||||||
| WBInteraction000424365 | |||||||||
| WBInteraction000541857 | |||||||||
| WBInteraction000561451 | |||||||||
| WBInteraction000571835 | |||||||||
| WBInteraction000576408 | |||||||||
| Map_info | Map | V | Position | 2.95086 | |||||
| Positive | Positive_clone | H19N07 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00056898 | ||||||||
| WBPaper00059730 | |||||||||
| WBPaper00059751 | |||||||||
| WBPaper00060613 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
