WormBase Tree Display for Gene: WBGene00010334
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WBGene00010334 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | del-5 | Person_evidence | WBPerson260 | |||||
WBPerson145 | |||||||||
Sequence_name | F59F3.4 | ||||||||
Molecular_name | F59F3.4 | ||||||||
F59F3.4.1 | |||||||||
CE31550 | |||||||||
Other_name | CELE_F59F3.4 | Accession_evidence | NDB | BX284606 | |||||
Public_name | del-5 | ||||||||
DB_info | Database | AceView | gene | XL622 | |||||
WormQTL | gene | WBGene00010334 | |||||||
WormFlux | gene | WBGene00010334 | |||||||
NDB | locus_tag | CELE_F59F3.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00010334|UniProtKB=G5EFH3 | |||||||
family | PTHR11690 | ||||||||
NCBI | gene | 186631 | |||||||
RefSeq | protein | NM_077437.5 | |||||||
TREEFAM | TREEFAM_ID | TF320082 | |||||||
TrEMBL | UniProtAcc | G5EFH3 | |||||||
UniProt_GCRP | UniProtAcc | G5EFH3 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 24 Feb 2012 15:34:46 | WBPerson2970 | Name_change | CGC_name | del-5 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | del | ||||||||
Allele (42) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (11) | |||||||||
Ortholog (24) | |||||||||
Paralog (30) | |||||||||
Structured_description | Automated_description | Predicted to enable ligand-gated sodium channel activity. Predicted to be involved in sodium ion transmembrane transport. Predicted to be located in membrane. Expressed in intestinal cell. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F59F3.4 | |||||||
Corresponding_CDS_history | F59F3.4:wp83 | ||||||||
Corresponding_transcript | F59F3.4.1 | ||||||||
Associated_feature | WBsf654381 | ||||||||
WBsf671010 | |||||||||
WBsf237928 | |||||||||
WBsf237929 | |||||||||
Experimental_info | RNAi_result | WBRNAi00016131 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00033219 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00049215 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00015929 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00048923 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00091095 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr16223 | ||||||||
Expr16225 | |||||||||
Expr1016641 | |||||||||
Expr1152959 | |||||||||
Expr2010851 | |||||||||
Expr2029089 | |||||||||
Drives_construct | WBCnstr00031494 | ||||||||
WBCnstr00042833 | |||||||||
WBCnstr00042835 | |||||||||
Construct_product | WBCnstr00031494 | ||||||||
WBCnstr00042835 | |||||||||
Microarray_results (21) | |||||||||
Expression_cluster (141) | |||||||||
Interaction (2) | |||||||||
Map_info | Map | X | Position | 2.8439 | |||||
Positive | Positive_clone | F59F3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00064140 | ||||||||
WBPaper00064563 | |||||||||
WBPaper00065080 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |