WormBase Tree Display for Gene: WBGene00010290
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WBGene00010290 | SMap | S_parent | Sequence | CHROMOSOME_V | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | Sequence_name | F58H1.7 | |||||
Molecular_name | F58H1.7a | ||||||
F58H1.7a.1 | |||||||
CE20895 | |||||||
F58H1.7b | |||||||
CE11412 | |||||||
F58H1.7b.1 | |||||||
Other_name | nrap-1 | Paper_evidence | WBPaper00053454 | ||||
Remark | This name was not requested prior to publication. It is felt that this would introduce confusion as there is a human gene NRAP which is not the ortholog of this gene. This gene also appears to be restricted to invertebrates as there is only a single fly ortholog according to AGR/DIOPT. | ||||||
CELE_F58H1.7 | Accession_evidence | NDB | BX284605 | ||||
Public_name | F58H1.7 | ||||||
DB_info | Database | AceView | gene | 5M444 | |||
WormQTL | gene | WBGene00010290 | |||||
WormFlux | gene | WBGene00010290 | |||||
NDB | locus_tag | CELE_F58H1.7 | |||||
Panther | gene | CAEEL|WormBase=WBGene00010290|UniProtKB=G5EBT2 | |||||
family | PTHR20967 | ||||||
NCBI | gene | 179636 | |||||
RefSeq | protein | NM_001047675.4 | |||||
NM_001047674.3 | |||||||
TrEMBL | UniProtAcc | G5EEF9 | |||||
G5EBT2 | |||||||
UniProt_GCRP | UniProtAcc | G5EBT2 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Allele (38) | |||||||
Strain | WBStrain00033186 | ||||||
RNASeq_FPKM (74) | |||||||
Ortholog (28) | |||||||
Structured_description | Automated_description | Expressed in glutamatergic neurons. Is predicted to encode a protein with the following domains: LDL receptor-like superfamily; Low-density lipoprotein (LDL) receptor class A repeat; and Low-density lipoprotein receptor domain class A. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F58H1.7a | |||||
F58H1.7b | |||||||
Corresponding_transcript | F58H1.7a.1 | ||||||
F58H1.7b.1 | |||||||
Other_sequence (47) | |||||||
Associated_feature (12) | |||||||
Experimental_info | RNAi_result | WBRNAi00002177 | Inferred_automatically | RNAi_primary | |||
WBRNAi00049072 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00111163 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00016027 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00033529 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr13695 | ||||||
Expr1017647 | |||||||
Expr1034490 | |||||||
Expr1152812 | |||||||
Expr2004426 | |||||||
Expr2022649 | |||||||
Drives_construct | WBCnstr00031523 | ||||||
WBCnstr00039944 | |||||||
Construct_product | WBCnstr00031523 | ||||||
WBCnstr00039944 | |||||||
Microarray_results (27) | |||||||
Expression_cluster (244) | |||||||
Interaction (91) | |||||||
Map_info | Positive | Positive_clone | F58H1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | V | 3.5457 | |||||
Reference | WBPaper00053454 | ||||||
WBPaper00060161 | |||||||
WBPaper00064302 | |||||||
Method | Gene |