WormBase Tree Display for Gene: WBGene00010290
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WBGene00010290 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | Sequence_name | F58H1.7 | |||||||
Molecular_name | F58H1.7a | ||||||||
F58H1.7a.1 | |||||||||
CE20895 | |||||||||
F58H1.7b | |||||||||
CE11412 | |||||||||
F58H1.7b.1 | |||||||||
Other_name | nrap-1 | Paper_evidence | WBPaper00053454 | ||||||
Remark | This name was not requested prior to publication. It is felt that this would introduce confusion as there is a human gene NRAP which is not the ortholog of this gene. This gene also appears to be restricted to invertebrates as there is only a single fly ortholog according to AGR/DIOPT. | ||||||||
CELE_F58H1.7 | Accession_evidence | NDB | BX284605 | ||||||
Public_name | F58H1.7 | ||||||||
DB_info | Database | AceView | gene | 5M444 | |||||
WormQTL | gene | WBGene00010290 | |||||||
WormFlux | gene | WBGene00010290 | |||||||
NDB | locus_tag | CELE_F58H1.7 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00010290|UniProtKB=G5EBT2 | |||||||
family | PTHR20967 | ||||||||
NCBI | gene | 179636 | |||||||
RefSeq | protein | NM_001047675.4 | |||||||
NM_001047674.3 | |||||||||
TrEMBL | UniProtAcc | G5EEF9 | |||||||
G5EBT2 | |||||||||
UniProt_GCRP | UniProtAcc | G5EBT2 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 02 Jan 2021 22:55:32 | WBPerson1983 | Name_change | Other_name | nrap-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (38) | |||||||||
Strain | WBStrain00033186 | ||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (28) | |||||||||
Structured_description | Automated_description | Expressed in glutamatergic neurons. Is predicted to encode a protein with the following domains: LDL receptor-like superfamily; Low-density lipoprotein (LDL) receptor class A repeat; and Low-density lipoprotein receptor domain class A. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F58H1.7a | |||||||
F58H1.7b | |||||||||
Corresponding_transcript | F58H1.7a.1 | ||||||||
F58H1.7b.1 | |||||||||
Other_sequence | AYC03160_1 | ||||||||
NB07208 | |||||||||
PPC05517_1 | |||||||||
NBC01059_1 | |||||||||
MC02424 | |||||||||
BU087063.1 | |||||||||
Name_isotig05334 | |||||||||
Acan_contig04134 | |||||||||
MJ00512 | |||||||||
SC01439 | |||||||||
MJC04517_1 | |||||||||
SSC00667_1 | |||||||||
PVC01610_1 | |||||||||
MI03758 | |||||||||
Tcir_isotig11927 | |||||||||
ACC01859_1 | |||||||||
MCC01079_1 | |||||||||
Tcol_isotig10883 | |||||||||
HBC07566_1 | |||||||||
ES743645.1 | |||||||||
AM743491.1 | |||||||||
BU665958.1 | |||||||||
MC03386 | |||||||||
TDC03262_1 | |||||||||
CRC09581_1 | |||||||||
CV200937.1 | |||||||||
Oden_isotig21805 | |||||||||
MI04477 | |||||||||
MI00688 | |||||||||
AE00353 | |||||||||
SS00591 | |||||||||
CBC07630_1 | |||||||||
BU088641.1 | |||||||||
GR977702.1 | |||||||||
NB07464 | |||||||||
JI212393.1 | |||||||||
Hbac_isotig04940 | |||||||||
JO474232.1 | |||||||||
MIC01106_1 | |||||||||
EL888565.1 | |||||||||
BU088459.1 | |||||||||
BU666743.1 | |||||||||
CJC01516_1 | |||||||||
CBC06764_1 | |||||||||
NAC00734_1 | |||||||||
FG588789.1 | |||||||||
CR10765 | |||||||||
Associated_feature (12) | |||||||||
Experimental_info | RNAi_result | WBRNAi00002177 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00049072 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00111163 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00016027 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00033529 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr13695 | ||||||||
Expr1017647 | |||||||||
Expr1034490 | |||||||||
Expr1152812 | |||||||||
Expr2004426 | |||||||||
Expr2022649 | |||||||||
Drives_construct | WBCnstr00031523 | ||||||||
WBCnstr00039944 | |||||||||
Construct_product | WBCnstr00031523 | ||||||||
WBCnstr00039944 | |||||||||
Microarray_results (27) | |||||||||
Expression_cluster (244) | |||||||||
Interaction (91) | |||||||||
Map_info | Positive | Positive_clone | F58H1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | 3.5457 | |||||||
Reference | WBPaper00053454 | ||||||||
WBPaper00060161 | |||||||||
WBPaper00064302 | |||||||||
Method | Gene |